Gene Pnap_3968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3968 
Symbol 
ID4687243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4235411 
End bp4235887 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content63% 
IMG OID639836985 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_984184 
Protein GI121606855 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.894838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0533414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG AAAAAAACAC CGCCGTCACC CTGCGCTTCA AGGTATCCGA TGCCCAGGGC 
AAGCTGATCG AGGACAGCAA GGAGCCCATG GTCTATCTGC ATGGCGGCTA CGGCAACACC
CTGCCCAAGA TCGAGCAGGC GCTCGAAGGC CAGGAAGCCG GCTACCAGAC CACGCTGGCG
CTGCAGCCCG AGGACGCCTT CGGCCTGCGC GACGAAGACC TGGTGCGCAC CATTCCGCGC
AGCCAGTTTC CGCCCGGCGT GAAGGTCGGC GGGCAACTCG AAGGCCAGGG CAGCGATGGC
CGCAAGCAGG TCTTCAACGT CGCCAAGATC AAGGGCAACA CCGTGATCCT GGACGCCAAC
CATCCGCTGG CCGGCAAGGC GCTGCGCTTT AGCCTAAAAG TCAGCGACGT GCGCCTGGCC
TCCGAAGAAG AAATCGCGCA CCAGCATGTG CATGGTGAGC ACGGCCACCA CCATTGA
 
Protein sequence
MKIEKNTAVT LRFKVSDAQG KLIEDSKEPM VYLHGGYGNT LPKIEQALEG QEAGYQTTLA 
LQPEDAFGLR DEDLVRTIPR SQFPPGVKVG GQLEGQGSDG RKQVFNVAKI KGNTVILDAN
HPLAGKALRF SLKVSDVRLA SEEEIAHQHV HGEHGHHH