Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3949 |
Symbol | |
ID | 4688829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 4214104 |
End bp | 4214670 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639836966 |
Product | FHA domain-containing protein |
Protein accession | YP_984165 |
Protein GI | 121606836 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1716] FOG: FHA domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0228001 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAAAA TGATCATTTC CCTGGACGGT GTAGTCCTCA AGGAAGTCCA GTTGACCAAA GACCGGACCT CCTTGGGCCG CAGGCCGTAC AACGACATCG TTATCGACAA CATGGCCGTC AGCGGCGAGC ATGCCGTTTT GCAGATGTCG GGCAACGAAG GCTACATTGA AGACCTCAAC AGTACCAACG GTACCTATGT CAACGGCAAG ACGGTCAAGA AGCAGCAACT GCACCACGAC GACATCGTCG AAATCGGCAA ATACAAAATT CAGTACGTCG ATGAAGCCAA TGCAGGCGCA AGCGCTGTCA GTGGCGCCAT CCGCGTCATG TCGGGCGCCG CCGCCGGCCG TGAAATGGCC CTGGTCAAGG CGGTGACCAC GCTTGGCAAG CCCGGCGTGG CCGTGGCCAC CATCACCAAA GGCCCTAGGG GTTTTGTCAT TGCCCATGTG GACGGCGCCA GCCAGCCCAT GCTGAATGGC GTGGCTGTGG GCATCGAAGC GGTTGCGCTC AGGGACGGCG ACAGGATTGA ACTGGCTGGG GCGCAGATGC AGTTCGTGGT GCATTGA
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Protein sequence | MPKMIISLDG VVLKEVQLTK DRTSLGRRPY NDIVIDNMAV SGEHAVLQMS GNEGYIEDLN STNGTYVNGK TVKKQQLHHD DIVEIGKYKI QYVDEANAGA SAVSGAIRVM SGAAAGREMA LVKAVTTLGK PGVAVATITK GPRGFVIAHV DGASQPMLNG VAVGIEAVAL RDGDRIELAG AQMQFVVH
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