Gene Pnap_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3948 
Symbol 
ID4688203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4213602 
End bp4213895 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content56% 
IMG OID639836965 
ProductDNA polymerase beta subunit 
Protein accessionYP_984164 
Protein GI121606835 
COG category[R] General function prediction only 
COG ID[COG1669] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0222602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTGC TTGACGAATT GCATGCAAAA CGCGATGTCA TACAAACACT GAGCCGCCGG 
TACGGGGCTC GCCGCATTCG TGTGTTTGGC TCCGTGGCCC GGCGTGAAGA GCGCCCCGAC
AGTGATGTGG ACTTTCTTGT GGATTTTCCG CGCGGCTACG ACTTGTTTGC CCAGCGCATC
CCCCTGACCG ATCAACTGGC CCAATTGCTC AAACGCCCGG TGGAATTGAT ACCCGAACAC
GAACTGAATC GCCATATTCG CGAACAAGTC CTGCGCGAAG TGGTTGAGCT ATGA
 
Protein sequence
MMLLDELHAK RDVIQTLSRR YGARRIRVFG SVARREERPD SDVDFLVDFP RGYDLFAQRI 
PLTDQLAQLL KRPVELIPEH ELNRHIREQV LREVVEL