Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3911 |
Symbol | |
ID | 4690060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 4175412 |
End bp | 4176281 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639836929 |
Product | hypothetical protein |
Protein accession | YP_984128 |
Protein GI | 121606799 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0547466 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTTACC CCGAATTGTT CAAGCAGCTC GAAGCCGTGC GCTGGAACAT GGACACCGAC ATCCCGTGGT CCGCTTTTGA CGCTTCGCTG CTGACCGACG AGCAGGCCCA GACCATCCGA ATGAACGCGA TCACCGAGTG GTCGGCCCTG CCGGCGACCG AAATGTTCCT GCGCGACAAC CGGGGCGACA GCGATTTCTC GGCCTTCATG TCAATCTGGT TTTTCGAGGA GCAAAAGCAT TCGCTGGTGC TGATGGAGTA TTTGCGGCGC TTCCGGCCCG AGCTGCTGCC GACCGAGCAA GAGCTGCACG CGGTGCGCTT CGAGTTCGAG CCCGCGCCGC CGCTCGAAAC CCTGATGCTG CATTTTTGCG GCGAGATTCG CCTGAACCAC TGGTACCGCT GCGCCAGCGA ATGGCATACC GAGCCGGTCA TCAAGCAAAT CTACACCCTG ATCGGCCAGG ACGAGGCGCG CCACGGCGGT GCTTATTTGC GCTACATGAA GCGCGCCATC GGCCAGTCCG GCATCGCGGC CAAGGCGGCT TTTGCCAAGG TCGGCGTGCT GATGGCCAGC GCGCGGCGCA CCTCGCAGGC CCTGCATCCG ACCAACCTGC ATGTCAACAA AGCTTTGTTC CCGCGCGATA CCGTCCAGAG CCGCTTGCCC GACCCCGAGT GGCTGGAACA CTGGCTGGAC ACGCAGATCT GCTTCGATGC GGTGTGGGAA AGCCGCGTGG TCGAGCGCAT CCTGCACAAT CTGGGGCTTT TGCTGGGCCA GCCTTTCAAG ACCGTCCAGC AGCTCAACCA CTACCGCAAG GAACTGGGGC GCCAGATGGC CGCGTCCCTG GAGCCCGGCG CCACACCCCA CGTTTCATGA
|
Protein sequence | MLYPELFKQL EAVRWNMDTD IPWSAFDASL LTDEQAQTIR MNAITEWSAL PATEMFLRDN RGDSDFSAFM SIWFFEEQKH SLVLMEYLRR FRPELLPTEQ ELHAVRFEFE PAPPLETLML HFCGEIRLNH WYRCASEWHT EPVIKQIYTL IGQDEARHGG AYLRYMKRAI GQSGIAAKAA FAKVGVLMAS ARRTSQALHP TNLHVNKALF PRDTVQSRLP DPEWLEHWLD TQICFDAVWE SRVVERILHN LGLLLGQPFK TVQQLNHYRK ELGRQMAASL EPGATPHVS
|
| |