Gene Pnap_3911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3911 
Symbol 
ID4690060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4175412 
End bp4176281 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content63% 
IMG OID639836929 
Producthypothetical protein 
Protein accessionYP_984128 
Protein GI121606799 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0547466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTACC CCGAATTGTT CAAGCAGCTC GAAGCCGTGC GCTGGAACAT GGACACCGAC 
ATCCCGTGGT CCGCTTTTGA CGCTTCGCTG CTGACCGACG AGCAGGCCCA GACCATCCGA
ATGAACGCGA TCACCGAGTG GTCGGCCCTG CCGGCGACCG AAATGTTCCT GCGCGACAAC
CGGGGCGACA GCGATTTCTC GGCCTTCATG TCAATCTGGT TTTTCGAGGA GCAAAAGCAT
TCGCTGGTGC TGATGGAGTA TTTGCGGCGC TTCCGGCCCG AGCTGCTGCC GACCGAGCAA
GAGCTGCACG CGGTGCGCTT CGAGTTCGAG CCCGCGCCGC CGCTCGAAAC CCTGATGCTG
CATTTTTGCG GCGAGATTCG CCTGAACCAC TGGTACCGCT GCGCCAGCGA ATGGCATACC
GAGCCGGTCA TCAAGCAAAT CTACACCCTG ATCGGCCAGG ACGAGGCGCG CCACGGCGGT
GCTTATTTGC GCTACATGAA GCGCGCCATC GGCCAGTCCG GCATCGCGGC CAAGGCGGCT
TTTGCCAAGG TCGGCGTGCT GATGGCCAGC GCGCGGCGCA CCTCGCAGGC CCTGCATCCG
ACCAACCTGC ATGTCAACAA AGCTTTGTTC CCGCGCGATA CCGTCCAGAG CCGCTTGCCC
GACCCCGAGT GGCTGGAACA CTGGCTGGAC ACGCAGATCT GCTTCGATGC GGTGTGGGAA
AGCCGCGTGG TCGAGCGCAT CCTGCACAAT CTGGGGCTTT TGCTGGGCCA GCCTTTCAAG
ACCGTCCAGC AGCTCAACCA CTACCGCAAG GAACTGGGGC GCCAGATGGC CGCGTCCCTG
GAGCCCGGCG CCACACCCCA CGTTTCATGA
 
Protein sequence
MLYPELFKQL EAVRWNMDTD IPWSAFDASL LTDEQAQTIR MNAITEWSAL PATEMFLRDN 
RGDSDFSAFM SIWFFEEQKH SLVLMEYLRR FRPELLPTEQ ELHAVRFEFE PAPPLETLML
HFCGEIRLNH WYRCASEWHT EPVIKQIYTL IGQDEARHGG AYLRYMKRAI GQSGIAAKAA
FAKVGVLMAS ARRTSQALHP TNLHVNKALF PRDTVQSRLP DPEWLEHWLD TQICFDAVWE
SRVVERILHN LGLLLGQPFK TVQQLNHYRK ELGRQMAASL EPGATPHVS