| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3909 |
|---|
| Symbol | |
|---|
| ID | 4690118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 4173805 |
|---|
| End bp | 4174800 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639836927 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_984126 |
|---|
| Protein GI | 121606797 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0317152 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCA TCAATTTCAA GGAGTTCGGC GAAGCCGATG TATTGCAGCT GGGCGACGCC
CCCGAACCGG TGCTGCGCCC GCATGACCTG CTGGTGCGCA ACCACGCGGT GGGCGTCAAC
CGCGCCGACC TGACGCACAG GCGCGGCGGC TACGGCCGTG CCAACTTCGG CGACTCAGAC
ATCATGGGGC TTGAGATCGC GGGCGAAGTC ATCGCCACCG GTGCCGAGGT CGATGGGTTC
CAGACCGGTG ACCGCGTCAT GGGCATCGTC GGCGGCGGCG CCTATGCGGA AATCGCGCGC
ATCGACTACC GGATGGCCAT GCACATCCCC GAGAGACTCG ACTACATCCA TGCGGCAGCG
ATTCCCGAAG TGTTCGTCAC GGCGCATGAA GCATTGGTTC ACCTGGGCCG CCTGCAGGCA
GGCGATGCCG TTCTGATTCA TGCAGCGGCA GGCGGCGTCG GCTCGGCCGC CGTGCAGTTG
GCGCATGCCA TCGGCACGCA GGTGTTTGCG ACCGCCGATG CCAGCAAGCT CGAGCGCGTC
CAGCAACTTG GCGCCGACCG GGGCATCGAC TACAAGACCG AAGACTTCGC CGCCGTGATC
GCCGGGGCCA CGGACGGACG CGGCGTCGAT GTGGTCATCG ATTTCATCGG CGCGCCATAC
CTTGAGCGCA ATCTCCTGAG CCTTGCGGAC GGCGGACGCC TGGTTCAGGT CGGCCTGCTG
GGCGGCGGCA AGAATGCCGC GCTGCCGCTG GACCGGCTGC TTTACAAACA CCTGCAGATC
ATGGGAACCG TCATGAAATC CCGGCCGCCA CAGGTCAAGC AGGCGATGGT GCGCAGGTTC
AGCGAACAGT GGCTGCGTCA TTTCGAGCGC GCAAACCTGG CGCCAGTGCT CGACAGTGTC
TTTGCGCTGT CAAAAGCGGC GGATGCGCAT CGGCGGATGG AATCGGGCTT GAACGTCGGC
AAGATTATTC TCATCCCCTT CGGAAACGGC GCTTAA
|
|---|
| Protein sequence | MKAINFKEFG EADVLQLGDA PEPVLRPHDL LVRNHAVGVN RADLTHRRGG YGRANFGDSD
IMGLEIAGEV IATGAEVDGF QTGDRVMGIV GGGAYAEIAR IDYRMAMHIP ERLDYIHAAA
IPEVFVTAHE ALVHLGRLQA GDAVLIHAAA GGVGSAAVQL AHAIGTQVFA TADASKLERV
QQLGADRGID YKTEDFAAVI AGATDGRGVD VVIDFIGAPY LERNLLSLAD GGRLVQVGLL
GGGKNAALPL DRLLYKHLQI MGTVMKSRPP QVKQAMVRRF SEQWLRHFER ANLAPVLDSV
FALSKAADAH RRMESGLNVG KIILIPFGNG A
|
|---|
| |