Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3881 |
Symbol | |
ID | 4689204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 4134675 |
End bp | 4135874 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639836899 |
Product | DNA protecting protein DprA |
Protein accession | YP_984098 |
Protein GI | 121606769 |
COG category | [L] Replication, recombination and repair [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.857304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTAGCG CCGCAGGAAT CCCCCGCCTT CAGGCGGGGG AGGATGTCAA GGATTCCCAA GAACTTCAAG CCTGGCTGCG GCTGGCACTC ACGCCCGGCG TGGGCAACAC CACGGCGCGC AAGCTGCTGG CGGCCTTCGG GTCGGCACAG GCCATTTTTG AACAAAGCAG CGCGACGCTG CAAAAACTCG GCTCCGACAA GCTGGCCAGC GCCCTGCGCA GCGAGCCATC CAGCCTGGCG ACCCAGCTGC AGACCACGCT GGACTGGCTG CAAGCCGGGG ACGACCGGCG CATCGCCGTG CTCGGCGACG CGGCTTACCC GGCGGCCCTG CTCGACATCG AAGACCCGCC CTTGATGCTT TATATGCTGG GCACGCTTTC CAGTCATGCT GATACAGCTA CCAAAACAAT AGCGAACAGT TTGGCCATCG TCGGCAGCCG CAACCCGACA CCGCAAGGTG AAAGCAATGC CCGGCAGTTT GCCAGGGCGT TCGGCAGCGC TGGCATCTGC GTGGTGTCGG GACTGGCGCT GGGCATCGAC GGCGCGGCGC ATGATGGCGC GATGCTGGGC GGCGGCGAGA CGATTGCGGT TGTCGGCACC GGACTGGACC GGGTCTACCC CAAAAAGCAC CTGGCCCTGG CGCACCGCAT TGCCCGGCAG GGCATGATCA TCAGCGAATT CCCGCTCGGA ACGCCGCCGC TGACGGCCAA TTTTCCCAGG CGCAACCGCA TCATTTCGGG CCTGAGCCGG GGAACGCTGG TGGTCGAGGC GGCGCTGCAG TCGGGCTCGC TGATCACCGC CCGGCTCGCG GCCGAGCAGG GCAAGGAAGT CTTTGCCATT CCCGGCTCCA TCCATTCGCC CCAGTCGCGC GGCTGCCATG CCTTGATCAA GCAAGGCGCC AAGCTGGTGG AAGTGGCTCA GGATGTGCTG GAAGAACTCA GGCTGGTGCC CGCCGGCGCA GCCCCGGCGG CTGATGCCTT GCAGGCGCCA GCGGAGGGCG ACGAGGGTGA TGCACCCGTT CCTGGCGGTG AAGACACGCT TCTGGCGGCG CTGGGATTCG ATGCGGTCAG CCTGGATGCG CTGCAGGCAC GCACCGGCCT GGATACCGGC CATCTACAGG CGCAATTGCT GGAGCTTGAA CTCGGCGGAC AGGTCGCGCG CCTGCCCGGA GGACTGTTTC AGCGCATGGC GGCGGGCTGA
|
Protein sequence | MRSAAGIPRL QAGEDVKDSQ ELQAWLRLAL TPGVGNTTAR KLLAAFGSAQ AIFEQSSATL QKLGSDKLAS ALRSEPSSLA TQLQTTLDWL QAGDDRRIAV LGDAAYPAAL LDIEDPPLML YMLGTLSSHA DTATKTIANS LAIVGSRNPT PQGESNARQF ARAFGSAGIC VVSGLALGID GAAHDGAMLG GGETIAVVGT GLDRVYPKKH LALAHRIARQ GMIISEFPLG TPPLTANFPR RNRIISGLSR GTLVVEAALQ SGSLITARLA AEQGKEVFAI PGSIHSPQSR GCHALIKQGA KLVEVAQDVL EELRLVPAGA APAADALQAP AEGDEGDAPV PGGEDTLLAA LGFDAVSLDA LQARTGLDTG HLQAQLLELE LGGQVARLPG GLFQRMAAG
|
| |