| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3876 |
|---|
| Symbol | |
|---|
| ID | 4689051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 4129371 |
|---|
| End bp | 4130120 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639836894 |
|---|
| Product | AzlC family protein |
|---|
| Protein accession | YP_984093 |
|---|
| Protein GI | 121606764 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGTGC GCCTCGGCAG CAGTCTTTCG GCGCTGCTTC GCCATCCCGA GTTCCGCACC
GGCGTGCAAG AGGTGTCGGG CGTCGCGCCC GGCCTGGCGG CCTGGGGCCT GATGACCGGC
GTGGCCATGG TGAATTCGGG CATGTCGGTG GTCGAGGCCG TGGCGATGAC GCTGCTGGTG
TTTGCCGGCA GTTCGCAACT GGCGGGCATT CCCCTGATTG CCGCTGGCGC CCCGGTCTGG
GTGATCCTGG CCACGAGCTT TTGCGTCAAC CTGCGCTTCG TGGTGTTCAG CGCCCATTTG
CGCAGCTACC TCATGCACCT GCCCCGGCCG GCGCGGCTGC TGGCCGGCTA CCTGTGCGCC
GATATGACCT ATGTGCTGTT TGTGCGCCGC TTTCCCCATC CGTCGCTGGA GCCGGCGCAG
CGCCAGGCGG AGCTGGCCTA TTTTGCCGGC AGCAGCGGCC TGAACTGGGT CAGCTGGCAG
GCGGCCAGCC TGCTGGGCAT TGCCCTGGCG CAGTGGATTC CCAGCGCCTG GGGCCTGGGG
TTTGCCGGCA TCCTGGCGCT GATCGGCGTC ACCTGCTCGC TCGCGTCGAG CCCCATGCGC
CGCGTCTCAG CCGGTGTGGC GGGCGCGGCG GCCGTGGCGG CGTTCGCGCT GCCGTACAAG
CTCAACATCG TGGTGGCGAT TGCCGTGGCG GTGGCGCTGT GCCTGCTGCT GGAGTCGCCC
GCGCCGTCTG ATCGCAGGGC TGCCGAATGA
|
|---|
| Protein sequence | MTVRLGSSLS ALLRHPEFRT GVQEVSGVAP GLAAWGLMTG VAMVNSGMSV VEAVAMTLLV
FAGSSQLAGI PLIAAGAPVW VILATSFCVN LRFVVFSAHL RSYLMHLPRP ARLLAGYLCA
DMTYVLFVRR FPHPSLEPAQ RQAELAYFAG SSGLNWVSWQ AASLLGIALA QWIPSAWGLG
FAGILALIGV TCSLASSPMR RVSAGVAGAA AVAAFALPYK LNIVVAIAVA VALCLLLESP
APSDRRAAE
|
|---|
| |