Gene Pnap_3874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3874 
Symbolpgk 
ID4689003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4127713 
End bp4128906 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content67% 
IMG OID639836892 
Productphosphoglycerate kinase 
Protein accessionYP_984091 
Protein GI121606762 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCA TCCGTTTTTC CGATTTGTGC GCCAGCGGCC AGGTGGCCGG CCAGCGCGTT 
TTCATCCGCG CCGACCTGAA CGTGCCGCAG GACGCCAGCG GCGCCATCAC CGAGGACACG
CGCATCCGCG CATCGGTTCC CTGCCTGCAG ATGGCGCTCG ATGCCGGCGC TGCCGTCATG
GTCACGTCGC ACCTCGGGCG CCCGGTGGAA GGCGAGTTCA AGCCGGCCGA TTCGCTGGCC
CCGGTTGCCA AACGGCTGGG CGAGCTGATG CAGCGCGATA TTCCCGTGGT CGCCGACTGG
GTCGATGGCG TTGAAGTCCA GCCCGGCCAG CTGGTGATGC TGGAAAACTG CCGCCTGAAC
CAGGGCGAGA AGAAAAACAA CGAAGCGCTG GCGCGCAAGA TGGCCGCGCT GTGCGACATC
TTCGTGCATG ACGCCTTCGG CACCGCGCAC CGGGCCGAAG CCTCGACCTA CGGCATCGCG
CAATATGCGC CGATTGCCTG CGCCGGACCG CTGCTGGCCG CCGAGATGGA CGCCATCACG
GCGGCCTTCG CCCATCCCAA GCGGCCGCTG GTCGCCATCG TCGCGGGCAG CAAGGTCTCG
ACCAAGCTGA CCATCCTCAA GGCGCTGGCC GAAAACGTCG ATCAGCTGAT CGTCGGCGGC
GGCATCGCCA ACACCTTCAT GCTGGCCGCC GGCCTGAACA TCGGCAAGAG CCTGGCCGAG
CCCGACCTGC TGGCCGAGGC CACGGCCGTG ATGGCCGCCA TGAAGGCCCG GGGTGCCGAG
GTGCCGATTC CGACCGACGT GGTGACCGCC AAGACCTTTG CCGCCGATGC GCCCGCCACC
GTCAAGCTGG CTGCCGAAGT CGAGGACGAT GACCTGATCC TGGACATCGG CCCCGAGACC
ACCGCCCGGC TGGCCGCGCA ACTCAAAAGC GCCGGCACCA TCGTCTGGAA CGGCCCGGTC
GGCGTGTTCG AGTTCGAGGC TTTTTCGAAG GGCACCGAAG GTATTGCCCG CGCGATTGCC
GACTCCAGCG CCTTCAGCAT TGCCGGCGGC GGCGACACGC TGGCGGCGAT TGCCAAGTAC
GGCATCGAAA AGCAGGTCGG CTACATCTCC ACCGGCGGCG GCGCTTTCCT CGAAGTGCTC
GAAGGCAAGA CGCTGCCGGC CTTCGAGATT TTGCAGAAGC GGGCAGCGGG CTGA
 
Protein sequence
MNFIRFSDLC ASGQVAGQRV FIRADLNVPQ DASGAITEDT RIRASVPCLQ MALDAGAAVM 
VTSHLGRPVE GEFKPADSLA PVAKRLGELM QRDIPVVADW VDGVEVQPGQ LVMLENCRLN
QGEKKNNEAL ARKMAALCDI FVHDAFGTAH RAEASTYGIA QYAPIACAGP LLAAEMDAIT
AAFAHPKRPL VAIVAGSKVS TKLTILKALA ENVDQLIVGG GIANTFMLAA GLNIGKSLAE
PDLLAEATAV MAAMKARGAE VPIPTDVVTA KTFAADAPAT VKLAAEVEDD DLILDIGPET
TARLAAQLKS AGTIVWNGPV GVFEFEAFSK GTEGIARAIA DSSAFSIAGG GDTLAAIAKY
GIEKQVGYIS TGGGAFLEVL EGKTLPAFEI LQKRAAG