Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3874 |
Symbol | pgk |
ID | 4689003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 4127713 |
End bp | 4128906 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639836892 |
Product | phosphoglycerate kinase |
Protein accession | YP_984091 |
Protein GI | 121606762 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTCA TCCGTTTTTC CGATTTGTGC GCCAGCGGCC AGGTGGCCGG CCAGCGCGTT TTCATCCGCG CCGACCTGAA CGTGCCGCAG GACGCCAGCG GCGCCATCAC CGAGGACACG CGCATCCGCG CATCGGTTCC CTGCCTGCAG ATGGCGCTCG ATGCCGGCGC TGCCGTCATG GTCACGTCGC ACCTCGGGCG CCCGGTGGAA GGCGAGTTCA AGCCGGCCGA TTCGCTGGCC CCGGTTGCCA AACGGCTGGG CGAGCTGATG CAGCGCGATA TTCCCGTGGT CGCCGACTGG GTCGATGGCG TTGAAGTCCA GCCCGGCCAG CTGGTGATGC TGGAAAACTG CCGCCTGAAC CAGGGCGAGA AGAAAAACAA CGAAGCGCTG GCGCGCAAGA TGGCCGCGCT GTGCGACATC TTCGTGCATG ACGCCTTCGG CACCGCGCAC CGGGCCGAAG CCTCGACCTA CGGCATCGCG CAATATGCGC CGATTGCCTG CGCCGGACCG CTGCTGGCCG CCGAGATGGA CGCCATCACG GCGGCCTTCG CCCATCCCAA GCGGCCGCTG GTCGCCATCG TCGCGGGCAG CAAGGTCTCG ACCAAGCTGA CCATCCTCAA GGCGCTGGCC GAAAACGTCG ATCAGCTGAT CGTCGGCGGC GGCATCGCCA ACACCTTCAT GCTGGCCGCC GGCCTGAACA TCGGCAAGAG CCTGGCCGAG CCCGACCTGC TGGCCGAGGC CACGGCCGTG ATGGCCGCCA TGAAGGCCCG GGGTGCCGAG GTGCCGATTC CGACCGACGT GGTGACCGCC AAGACCTTTG CCGCCGATGC GCCCGCCACC GTCAAGCTGG CTGCCGAAGT CGAGGACGAT GACCTGATCC TGGACATCGG CCCCGAGACC ACCGCCCGGC TGGCCGCGCA ACTCAAAAGC GCCGGCACCA TCGTCTGGAA CGGCCCGGTC GGCGTGTTCG AGTTCGAGGC TTTTTCGAAG GGCACCGAAG GTATTGCCCG CGCGATTGCC GACTCCAGCG CCTTCAGCAT TGCCGGCGGC GGCGACACGC TGGCGGCGAT TGCCAAGTAC GGCATCGAAA AGCAGGTCGG CTACATCTCC ACCGGCGGCG GCGCTTTCCT CGAAGTGCTC GAAGGCAAGA CGCTGCCGGC CTTCGAGATT TTGCAGAAGC GGGCAGCGGG CTGA
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Protein sequence | MNFIRFSDLC ASGQVAGQRV FIRADLNVPQ DASGAITEDT RIRASVPCLQ MALDAGAAVM VTSHLGRPVE GEFKPADSLA PVAKRLGELM QRDIPVVADW VDGVEVQPGQ LVMLENCRLN QGEKKNNEAL ARKMAALCDI FVHDAFGTAH RAEASTYGIA QYAPIACAGP LLAAEMDAIT AAFAHPKRPL VAIVAGSKVS TKLTILKALA ENVDQLIVGG GIANTFMLAA GLNIGKSLAE PDLLAEATAV MAAMKARGAE VPIPTDVVTA KTFAADAPAT VKLAAEVEDD DLILDIGPET TARLAAQLKS AGTIVWNGPV GVFEFEAFSK GTEGIARAIA DSSAFSIAGG GDTLAAIAKY GIEKQVGYIS TGGGAFLEVL EGKTLPAFEI LQKRAAG
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