Gene Pnap_3854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3854 
Symbol 
ID4688269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4109660 
End bp4110493 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content67% 
IMG OID639836872 
Productiron permease FTR1 
Protein accessionYP_984071 
Protein GI121606742 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0672] High-affinity Fe2+/Pb2+ permease 
TIGRFAM ID[TIGR00145] FTR1 family protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCCG CCGCACTCAT CGTTTTTCGT GAATCACTGG AAGCTTCGCT GATCATCAGC 
ATCATGGCCG CCGCCACGCT CGGGATTGCC TCTCGCGGGC GCTGGATAGC CGCCGGAATA
CTTGCCGGGC TCGCGGGCGC GGCGCTGGTG GCGTCGAGCA TGGGGCTGAT TTCCGACATG
GCCAGCGGCG TCGGCCAGGA ACTGTTCAAT GCCGGCATCC TGATCCTGGC CGTGGGCATG
CTGGCCTGGC ACAACATCTG GATGTCGATT CATGGCCGCG AAATGGCCGC GCAGGCCAAG
AGCACCGCGC GCGCCATCCA TGACGGCAGC CGCGAGCGTT CCGTGATCTT CATGGTGGTG
GCCCTGGCCG TCCTGCGCGA AGGCTCGGAG ACGGTGCTGT TTCTCTACGG CCTGGCCACC
AGCAGCGAAG ACGGGCTGCG CAACACCGTT GGCGGCGGGC TTAGCGGCCT GGCGGCGGGC
CTGCTGGTCG GCGGCCTGCT GTACGCGGGG CTGCTGCGCA TTCCGTTGCG CTGGTTTTTC
TCGATCACCG GCGTCTTCGT CTTGTTGCTG GCCGCCAGCA TGGCTTCGCA GGCCGCCCGC
TTCCTGATCC AGGCCGATCT GCTGCCCAGC CTTGGCGCGC CGCTGTGGGA CAGTTCGGGC
CTGCTGTCGC AGACCTCGGC GGCCGGAACC CTGCTGCACG GACTGATCGG CTACGAAGCA
CAGCCGGCGG GCATGCAGAT TGTGTTTTAC GTGGCGGTCG TGCTGGCCAT CACGGCCGGC
ATGCGCTGGG TGAATTCGCG CGGCCCCGTC AGGAATTCAG CCCAGCCAGC CTAG
 
Protein sequence
MFAAALIVFR ESLEASLIIS IMAAATLGIA SRGRWIAAGI LAGLAGAALV ASSMGLISDM 
ASGVGQELFN AGILILAVGM LAWHNIWMSI HGREMAAQAK STARAIHDGS RERSVIFMVV
ALAVLREGSE TVLFLYGLAT SSEDGLRNTV GGGLSGLAAG LLVGGLLYAG LLRIPLRWFF
SITGVFVLLL AASMASQAAR FLIQADLLPS LGAPLWDSSG LLSQTSAAGT LLHGLIGYEA
QPAGMQIVFY VAVVLAITAG MRWVNSRGPV RNSAQPA