Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3839 |
Symbol | |
ID | 4687839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 4095881 |
End bp | 4096777 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639836857 |
Product | regulation of phenolics degradation protein |
Protein accession | YP_984056 |
Protein GI | 121606727 |
COG category | [C] Energy production and conversion |
COG ID | [COG4313] Protein involved in meta-pathway of phenol degradation |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTCT ATCAACAATC GATGGCCACC ACCGTGGCCC TGCTGGCTGC GCTGGCCGGC ACAGTCGCCC AGGCAGAGGG ACATTACGTC ACCGGCGTGG AGGGCATGCA GGGCTCCAGC GTACCGCCGC CCGGCAACTA CTACCTCGGC TACCTTGTCC AGTACGACAT CAACAGCTTT CGCGTGCCCG GCACAACCGC CAACCTGCCC GGCAGCAACA CCGGCACCGT CACCGCCCTG GCCAACCGCT TTGTCAAGGT CACGCCCACC CAAGTGCTGG GCGCGGACTA CGGCTACGAG ATGATCTTGC CGGTGGTGCG CACCTCGCTG AGCATCGGTG CCGCCGGCAT TGACGACAGC CAGAGCGGCG TGGGCGATGT GTACCTCGGC CCGCTGGTGC TGGGCTGGCA TGGCCCGCAA TGGGACGCAG TGGCCGCTGC CGGCATGTGG CTGGACTCGG GCAGCACCAA CGGCCCTGCC GCCCCCGGCA AGGGCTACAA GTCCACCATG CTGACCGGCG GGGTGACCTA CTACTTCGAC AGCGCCAAGT CGGTGTCGGG GTCGGCACTG TTCCGCTTTG AACGCCACGG CAAAAACGAC GCAGGCCTGC GTGCCGGCAA CCAGTTGTCG CTGGAATGGG GCGTGGGCAA GAATTTGGGC ACGGTGCAGG TCGGCGTGGT GGGCTACAGC CAGTGGCAGC TCAGCCAGGA CAGTGGCATG GGGGCCACCA GCGACAAATC CTCACGTCAT GCCGTGGGTG CAGAACTGGT TTACCCCGTT CCCGGCGCAG GCATGTTCCT GAAGGGCGCT GCCTACAAAG AGTTCAGCGT GGAAGGAGGC AGCAAGGCCG AGGCCAAGGG CAACATGCTG CGATTCAGCG TGGTCAAAGC GTTCTGA
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Protein sequence | MNVYQQSMAT TVALLAALAG TVAQAEGHYV TGVEGMQGSS VPPPGNYYLG YLVQYDINSF RVPGTTANLP GSNTGTVTAL ANRFVKVTPT QVLGADYGYE MILPVVRTSL SIGAAGIDDS QSGVGDVYLG PLVLGWHGPQ WDAVAAAGMW LDSGSTNGPA APGKGYKSTM LTGGVTYYFD SAKSVSGSAL FRFERHGKND AGLRAGNQLS LEWGVGKNLG TVQVGVVGYS QWQLSQDSGM GATSDKSSRH AVGAELVYPV PGAGMFLKGA AYKEFSVEGG SKAEAKGNML RFSVVKAF
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