Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3806 |
Symbol | |
ID | 4686767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 4058809 |
End bp | 4059732 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639836824 |
Product | LysR family transcriptional regulator |
Protein accession | YP_984023 |
Protein GI | 121606694 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.335856 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCA TTAATTTTGA TTTGCAGCAA CTGCAGGGTT TTGTGGCCGT GGCCGAGCGC GGCAGCTTTC GCGCGGCGGC CGAGCACATC AACCTGTCGG CCCCGGCGCT GAGCCGGCGC ATCGACAAAC TGGAAACCAT CCTGGGCGCG CGCCTGTTCA ACCGCACCAC GCGCGAGGTT GAACTCACGC CGCTGGGCCG GGTGTTCCTG GAGCGCGCGC GCACCGCGCT GGACGACCTG GAGTCGGCCA TGCTGGGCAT TGCCGACATC GCCACCCACC GGGGCGGGCG CGTGACGGTG GCCTGCGTGC CGTCGGCCGC CCTGTACTTT TTACCGAGTG TGATCAGCAG CTTTTCCCGG AACTACCCCG GCATCCGCGT GCGGGTGGTC GATGAGTCGA TGAACCAGGT GCTGCAAAGC GTGCTGTCGG GCGATGCTGA CTTTGGCATC GGCTTCATGA ACACCCTGAC GCCCGAGATT GCCTTCGAGT CCATCCACGA TGATCCGTTT GTGCTGGCCA TGCCGCGCAC ACACCCGCTC GCCAAACGCA AGACGGTGAA CTGGGCGGAT GTGGAGAAGG AAAGCCTGAT TGCCGTGGCG CGAAGCAGCG GCAACCGCCA GCTGCTGGAC GATTCGCTGA CCAAGGCCGG CCTGAACCCG AGCTTTGCGT TCGAAGTGAG CCACGTCGCA ACGCTGCTGG GCATGGTGGA GGCGGGCCTG GGCCTGGCGG CCGTGCCGCG CATGGCGCTG TCCACCACGC ACGCCACGCT GGTGGGCCTG CCCCTGCGCC AGCCGCAAAC CGTGCGCAGG GTGGGTCTCT TGAGGCGCCA TGGCGTCAAG CTCCGGCCGG CGGCCGAGAT GTTTCACCAG CATCTGCGCA CGGCATTGAA GACCCGCAAG CCCGCCGCTG GCGACCCGGC CTGA
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Protein sequence | MARINFDLQQ LQGFVAVAER GSFRAAAEHI NLSAPALSRR IDKLETILGA RLFNRTTREV ELTPLGRVFL ERARTALDDL ESAMLGIADI ATHRGGRVTV ACVPSAALYF LPSVISSFSR NYPGIRVRVV DESMNQVLQS VLSGDADFGI GFMNTLTPEI AFESIHDDPF VLAMPRTHPL AKRKTVNWAD VEKESLIAVA RSSGNRQLLD DSLTKAGLNP SFAFEVSHVA TLLGMVEAGL GLAAVPRMAL STTHATLVGL PLRQPQTVRR VGLLRRHGVK LRPAAEMFHQ HLRTALKTRK PAAGDPA
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