Gene Pnap_3798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3798 
Symbol 
ID4686571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4049925 
End bp4051349 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content63% 
IMG OID639836816 
ProductNAD(P) transhydrogenase, beta subunit 
Protein accessionYP_984015 
Protein GI121606686 
COG category[C] Energy production and conversion 
COG ID[COG1282] NAD/NADP transhydrogenase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.998384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGA ACATCGTCAC GCTGCTGTAC CTGGTGGCTT CCGTCTTCTT CATCCAGGCG 
CTCAAGGGCC TGTCGCACCC GACCACCTCG CTGCGCGGCA ACCTGTTCGG CATGGTCGGC
ATGGGTATTG CCATCCTGAC CACCGGCGCG CTGATTGTCG AGACCGCCGG CAGCAATGCC
GGCGGCATGG TGTACGTGTT GGGGGCGCTG CTCGTCGGCG GCGCTGCCGG CACGATGATG
GCCAAGCGCG TCGAGATGAC CAAGATGCCC GAGCTGGTCG CTTTCATGCA CAGCATGATC
GGCCTGGCGG CGGTGTTTAT CGCCGTCGCT GCCGTGGCCG AGCCTTACGC CTTCGGCATC
GTCGCCAAGG GCGAGGAGAT TCCGGCGGGC AATCGGCTGG AGCTGTTCCT CGGTGCGGCG
ATTGGCGCCA TCACCTTCAG CGGCTCGGTG ATTGCGTTTG GCAAGCTCTC GGGCAAGTAC
AAGTTCCGGC TGTTCCAGGG CGCGCCGGTG TCGTTTCCCG GCCAGCACAA GCTCAACCTG
GTGCTGGGCC TGCTGACGCT GGGGCTGGGC GTGGCCTTCA TGCTGACGGG CAGCTGGACG
GCATTTTTCG CCATGCTCGC GCTGTCCTTC GTGATGGGCG TGCTGATCAT CATCCCGATT
GGCGGCGCCG ACATGCCGGT GGTGGTGTCC ATGCTCAACA GCTACTCGGG CTGGGCGGCG
GCGGGCATCG GCTTTTCGCT GAACAACTCC ATGCTGATCA TTGCCGGTTC GCTGGTGGGC
TCGTCGGGCG CGATCCTGAG CTACATCATG TGCAAGGCGA TGAACCGCTC GTTCTTCAAC
GTGATCGGGG GCGGCTTCGG CGGCGAGGCG ACCACGGCAG CCTCTGGCGC CAAGGAACAG
CGTCCGGTCA AGTCCGGCTC GGCCGATGAT GCCGCCTTCA TTCTGGGCAA TGCCGAAACC
GTGATCATCG TGCCGGGCTA CGGCCTGGCC GTCGCTAGAG CCCAGCACTC GGTCAAGGAA
CTGGCGCAAA AGCTCACCGA GAAGGGTATC ACCGTCAAGT ACGCGATTCA CCCGGTGGCA
GGGCGCATGC CCGGTCACAT GAACGTGCTG CTGGCCGAGG CCGAAGTGCC TTACGACCAG
GTGTTCGAGA TGGAGGACAT CAATGCCGAA TTCGGTCAGG CCGATGTGGC CATCATCCTG
GGTGCCAACG ACGTGGTGAA CCCGGCCGCG CATGTCAAGG GCAGCGCGAT TTACGGCATG
CCGATCCTGG AGGCCTACAA GGCCAAGACC GTCATCGTCA ACAAGCGCTC GATGGCCGCA
GGCTACGCCG GGCTGGACAA CGAATTGTTC TACATGGACA AGACCATGAT GGTCTTCGGC
GATGCCAAGA AGATCATCGA GGACATGGGC AAGGCCATCG AGTAA
 
Protein sequence
MSMNIVTLLY LVASVFFIQA LKGLSHPTTS LRGNLFGMVG MGIAILTTGA LIVETAGSNA 
GGMVYVLGAL LVGGAAGTMM AKRVEMTKMP ELVAFMHSMI GLAAVFIAVA AVAEPYAFGI
VAKGEEIPAG NRLELFLGAA IGAITFSGSV IAFGKLSGKY KFRLFQGAPV SFPGQHKLNL
VLGLLTLGLG VAFMLTGSWT AFFAMLALSF VMGVLIIIPI GGADMPVVVS MLNSYSGWAA
AGIGFSLNNS MLIIAGSLVG SSGAILSYIM CKAMNRSFFN VIGGGFGGEA TTAASGAKEQ
RPVKSGSADD AAFILGNAET VIIVPGYGLA VARAQHSVKE LAQKLTEKGI TVKYAIHPVA
GRMPGHMNVL LAEAEVPYDQ VFEMEDINAE FGQADVAIIL GANDVVNPAA HVKGSAIYGM
PILEAYKAKT VIVNKRSMAA GYAGLDNELF YMDKTMMVFG DAKKIIEDMG KAIE