| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3792 |
|---|
| Symbol | |
|---|
| ID | 4686111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 4043488 |
|---|
| End bp | 4044438 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639836810 |
|---|
| Product | HPr kinase/phosphorylase |
|---|
| Protein accession | YP_984009 |
|---|
| Protein GI | 121606680 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism |
|---|
| TIGRFAM ID | [TIGR00679] Hpr(Ser) kinase/phosphatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCCA CCGTTGTCAG CGCGGATGTC TTGTTCGAAG ATCACCGCGC CACCCTGAAG
TGGGAGTGGG TCGCCGGGCT GGGGGCTTCG GAACGGCGCT TTGATGAAGT GGCGGTCAGC
GAAGCACGCT CCGGGGCCGA TCTGGTCGGC TACCTCAATT ACATCCACCC CTATCGCGTG
CAAATACTGG GTGAGCGCGA AGTAGCTTAC CTCTCCCATG TCGGCCCCGA GGACAGCGCA
CGCCGAATTT CCCGCATCAT CACGCTGGAG CCGCCGGTGC TGGTGGTTGC CGACGGCCAG
ACCGCGCCCG ACACGCTGCT GTCCATGTGC GAACGTGCCC AGTTGCCCAT GTTTGCCACT
CCCGAGTCGG CCGCTTTCGT GATTGATGTG CTGCGGGCGT ATCTCTCCAG GCATTTTGCC
GAGCGTACGT CGATGCACGG CGTGTTCATG GACATTCTGG GCATGGGCGT GATGATCACC
GGCGAGTCGG GGCTTGGCAA AAGCGAGTTG GGGCTGGAAC TGATATCGCG TGGCCATGGC
CTGGTGGCCG ATGACGCCAT CGACCTGTTC CGCATCAATC AGACGGCCAT TGAAGGGCGT
TGCCCTGACC TGCTGCAAAA CCTGCTTGAA GTGCGCGGCA TTGGCCTGCT CGACATCAAG
GCGATTTTTG GTGAAACGGC GGTGCGCCGC AAGATGCGCC TGAAAATGAT CGTGCATCTG
GTGCGCCGTG AAACGCTGGA GCGGGACTAC GAACGCATCC CGTATGAGCC GCTGACGCAG
GACGTGCTGG GCGTTCCGGT GCGCAAGGTC ATCATCCAGG TGGAAGCCGG CCGCAACATC
GCGGTGCTGG TCGAGGCGGC TGTGCGCAAT GCCATCTTGC AGTTGCGCGG CATCAATACC
TACCAGGAAT TCGTCGAGCG CCACCGACGC GCGATGGAAC AGGACGACTG A
|
|---|
| Protein sequence | MKPTVVSADV LFEDHRATLK WEWVAGLGAS ERRFDEVAVS EARSGADLVG YLNYIHPYRV
QILGEREVAY LSHVGPEDSA RRISRIITLE PPVLVVADGQ TAPDTLLSMC ERAQLPMFAT
PESAAFVIDV LRAYLSRHFA ERTSMHGVFM DILGMGVMIT GESGLGKSEL GLELISRGHG
LVADDAIDLF RINQTAIEGR CPDLLQNLLE VRGIGLLDIK AIFGETAVRR KMRLKMIVHL
VRRETLERDY ERIPYEPLTQ DVLGVPVRKV IIQVEAGRNI AVLVEAAVRN AILQLRGINT
YQEFVERHRR AMEQDD
|
|---|
| |