Gene Pnap_3742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3742 
Symbol 
ID4686226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3987311 
End bp3988522 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content69% 
IMG OID639836760 
ProductVWA containing CoxE family protein 
Protein accessionYP_983959 
Protein GI121606630 
COG category[R] General function prediction only 
COG ID[COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.65677 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAT CTACTTTCCC CCCAGCCTCT CCGTCCCTTC CCGACGAAGC CCGCCTGCGC 
CGCTGGCGCC TCGTGCTGGG CGGCGAAGCC GAAAGCAGTT GCGGCAAGCT CTCGGGCGCG
CCGGCTGAAA TGGACCAGGC GCTGTCCGCC CTCTACGACG CCGACGGCAA GAACGGCCTG
GGCCGCAGCA GCAGCCGCCA GGGCGGGCGC GGTGGCTCGG CGCCCAGCGT GGCGCGCTGG
CTGGGCGACA TCCGCAAATA CTTTCCCAGC TCCGTCGTGC AGGTCATGCA GCACGACGCG
CTGGAGCGGC TGAACCTGCG CGACATGCTG CTGCAGCCCG AAATGCTGGA GAGCGTCCAG
CCCGACGTGC ATCTGGTCGC CAGCCTGATT TCGCTCTCGC GCGTGATTCC CGCCACCACC
AAGGAAACCG CCCGCATGGT GGTGCGCAAG GTGGTCGAGG CGCTGCTGAA AAAGCTCGAA
GAGCCGATGC GCTCGGCGGT GAGCGGTGCG CTCGACCGCA GCCAGCGCAA CCGCCGCCCG
CGCCACAGCG AGATCGACTG GAACCGCACC ATCCGCGCCA ACCTCAAGCA CTGGCAGCCC
GACTACCGCA CCATCGTGCC CGAGCGGCTG ATCGGCTATG GCCGCAAGGC CCGCAGCCCG
CAGCGCGAAG TCGTGCTGTG CATCGACCAG AGCGGCTCGA TGGCCGCGTC GGTGGTGTAT
TCGAGCATCT TCGGCGCGGT AATGGCGTCG CTGCCGGCCG TGGCGACCAA GCTGGTGGTG
TTCGACACCG CCATCGTCGA TCTGACCGAG CAGCTCGACG ACCCGGTGGA GCTGCTGTTC
GGCGTGCAGC TGGGCGGCGG CACCGACATC AACGGCGCGG TGGGCTACTG CCAGTCGGTC
ATCCGCGAGC CGCGCAACAC GATTCTGGTG TTGATTTCGG ATTTGTACGA AGGCGGCGTG
GAAGCGAATC TGCTGCGCCG CGCCGCCGAG CTGGTGGCCT CGGGCGTGCA GTTCATCACG
CTGCTGGCGC TGAGCGACGA AGGCGCGCCG TCTTATGACC GCGCGCTGGC GGCCAAGCTG
GCCGCGCTGG GCGTGCCGTC GTTCGCCTGC ACGCCGGACG CCTTTCCGGG TTTGATGGCG
GCGGCCATCC GCAAGGAAGA CATCAACGCC TGGGCGGCTG GTCAGGGACT GCTGGCGACG
CGGGGGCGCT GA
 
Protein sequence
MSESTFPPAS PSLPDEARLR RWRLVLGGEA ESSCGKLSGA PAEMDQALSA LYDADGKNGL 
GRSSSRQGGR GGSAPSVARW LGDIRKYFPS SVVQVMQHDA LERLNLRDML LQPEMLESVQ
PDVHLVASLI SLSRVIPATT KETARMVVRK VVEALLKKLE EPMRSAVSGA LDRSQRNRRP
RHSEIDWNRT IRANLKHWQP DYRTIVPERL IGYGRKARSP QREVVLCIDQ SGSMAASVVY
SSIFGAVMAS LPAVATKLVV FDTAIVDLTE QLDDPVELLF GVQLGGGTDI NGAVGYCQSV
IREPRNTILV LISDLYEGGV EANLLRRAAE LVASGVQFIT LLALSDEGAP SYDRALAAKL
AALGVPSFAC TPDAFPGLMA AAIRKEDINA WAAGQGLLAT RGR