Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3742 |
Symbol | |
ID | 4686226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3987311 |
End bp | 3988522 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639836760 |
Product | VWA containing CoxE family protein |
Protein accession | YP_983959 |
Protein GI | 121606630 |
COG category | [R] General function prediction only |
COG ID | [COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.65677 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAT CTACTTTCCC CCCAGCCTCT CCGTCCCTTC CCGACGAAGC CCGCCTGCGC CGCTGGCGCC TCGTGCTGGG CGGCGAAGCC GAAAGCAGTT GCGGCAAGCT CTCGGGCGCG CCGGCTGAAA TGGACCAGGC GCTGTCCGCC CTCTACGACG CCGACGGCAA GAACGGCCTG GGCCGCAGCA GCAGCCGCCA GGGCGGGCGC GGTGGCTCGG CGCCCAGCGT GGCGCGCTGG CTGGGCGACA TCCGCAAATA CTTTCCCAGC TCCGTCGTGC AGGTCATGCA GCACGACGCG CTGGAGCGGC TGAACCTGCG CGACATGCTG CTGCAGCCCG AAATGCTGGA GAGCGTCCAG CCCGACGTGC ATCTGGTCGC CAGCCTGATT TCGCTCTCGC GCGTGATTCC CGCCACCACC AAGGAAACCG CCCGCATGGT GGTGCGCAAG GTGGTCGAGG CGCTGCTGAA AAAGCTCGAA GAGCCGATGC GCTCGGCGGT GAGCGGTGCG CTCGACCGCA GCCAGCGCAA CCGCCGCCCG CGCCACAGCG AGATCGACTG GAACCGCACC ATCCGCGCCA ACCTCAAGCA CTGGCAGCCC GACTACCGCA CCATCGTGCC CGAGCGGCTG ATCGGCTATG GCCGCAAGGC CCGCAGCCCG CAGCGCGAAG TCGTGCTGTG CATCGACCAG AGCGGCTCGA TGGCCGCGTC GGTGGTGTAT TCGAGCATCT TCGGCGCGGT AATGGCGTCG CTGCCGGCCG TGGCGACCAA GCTGGTGGTG TTCGACACCG CCATCGTCGA TCTGACCGAG CAGCTCGACG ACCCGGTGGA GCTGCTGTTC GGCGTGCAGC TGGGCGGCGG CACCGACATC AACGGCGCGG TGGGCTACTG CCAGTCGGTC ATCCGCGAGC CGCGCAACAC GATTCTGGTG TTGATTTCGG ATTTGTACGA AGGCGGCGTG GAAGCGAATC TGCTGCGCCG CGCCGCCGAG CTGGTGGCCT CGGGCGTGCA GTTCATCACG CTGCTGGCGC TGAGCGACGA AGGCGCGCCG TCTTATGACC GCGCGCTGGC GGCCAAGCTG GCCGCGCTGG GCGTGCCGTC GTTCGCCTGC ACGCCGGACG CCTTTCCGGG TTTGATGGCG GCGGCCATCC GCAAGGAAGA CATCAACGCC TGGGCGGCTG GTCAGGGACT GCTGGCGACG CGGGGGCGCT GA
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Protein sequence | MSESTFPPAS PSLPDEARLR RWRLVLGGEA ESSCGKLSGA PAEMDQALSA LYDADGKNGL GRSSSRQGGR GGSAPSVARW LGDIRKYFPS SVVQVMQHDA LERLNLRDML LQPEMLESVQ PDVHLVASLI SLSRVIPATT KETARMVVRK VVEALLKKLE EPMRSAVSGA LDRSQRNRRP RHSEIDWNRT IRANLKHWQP DYRTIVPERL IGYGRKARSP QREVVLCIDQ SGSMAASVVY SSIFGAVMAS LPAVATKLVV FDTAIVDLTE QLDDPVELLF GVQLGGGTDI NGAVGYCQSV IREPRNTILV LISDLYEGGV EANLLRRAAE LVASGVQFIT LLALSDEGAP SYDRALAAKL AALGVPSFAC TPDAFPGLMA AAIRKEDINA WAAGQGLLAT RGR
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