Gene Pnap_3671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3671 
Symbol 
ID4688168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3903243 
End bp3904025 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content69% 
IMG OID639836689 
ProductCRP/FNR family transcriptional regulator 
Protein accessionYP_983888 
Protein GI121606559 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTCG GGAAAGACCT CTCCCTGGCC AACCGGCTGA TCTCGGCGCT GCCAGCGCCA 
GAACGCGCCT TGCTGCTGGC GCATTGCGAG CTGGTCGAAC TCAGGCACCG GCAGGTGCTG
AGCCAGGCGG GCCGGCCGCT GGACTACGCC TGGTTCCCGC TGGACAGCTT TGTCTGTGTC
GTCATGCCCT CGGACGATGC GCCCGATGTC CAGGTCGCGA TGGTGGGCAA CGAAGGCATG
TTGCACACGT CGCTGGTGCT CAGGGTCGCC ACGTCCGCGT TCACCGGCGC GGTCCAGGGC
GCGGGCCGGG CCTTTCGCAT CCCTCGCGGC GCGCTGGAGT CGCGGCTGCT TGACGACCCC
TTTCTGCGCG ACGTGCTGAG CCGCTATGCC GCTGTGTTCC AGACGCATCT GGCCCGGCAG
CTGGTCTGCG TCAGCCACCA CACGCTCCTG CAGCGCCTGG CGCGCTGGCT GCTGATGACG
CGCGACCTGT CGCATTCGAG CGAGCTGTTC CTGACCCACC AGGCGCTGGC CTTCATGCTG
GGCGTGCGGC GCGAAAGCGT GAGCCGGGCC GCCAGCGCCT TCGAGCAGCG CGGCCTGGTC
AGCTACAGCC ATGGCTACAT GATGCTGCGC GACGAGGCCG GCCTGGAGCG CATCAGTTGC
CACTGCTACC AGGCCAGCCT GCTGGCCTAC GAGCGAATCC TGGAGTTTCC GGCCGGGGTT
GGTAGCCCGG GCTTGTGGCG CGGGCCGATA ATCAGCGGCC TGCCTGCCGA CCTGGACGCC
TGA
 
Protein sequence
MAVGKDLSLA NRLISALPAP ERALLLAHCE LVELRHRQVL SQAGRPLDYA WFPLDSFVCV 
VMPSDDAPDV QVAMVGNEGM LHTSLVLRVA TSAFTGAVQG AGRAFRIPRG ALESRLLDDP
FLRDVLSRYA AVFQTHLARQ LVCVSHHTLL QRLARWLLMT RDLSHSSELF LTHQALAFML
GVRRESVSRA ASAFEQRGLV SYSHGYMMLR DEAGLERISC HCYQASLLAY ERILEFPAGV
GSPGLWRGPI ISGLPADLDA