Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3650 |
Symbol | trpD |
ID | 4689060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3885440 |
End bp | 3886543 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639836668 |
Product | anthranilate phosphoribosyltransferase |
Protein accession | YP_983867 |
Protein GI | 121606538 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACT TTCTGCTGCC GCCATCAAGC CCAAACACCT CACCATCAAG AAACCCCATG CCCAACAGCC ACAAGATCAC CGCCAGCGAA GCCCTGCAGC GCACCATCGA GCACCGCGAG ATTTTTCATG ACGAGATGCT GCACATCATG CGGCTCATCA TGAGTGGCGA GATGTCGCCG CTCATGACGG CGGCGCTGAT CACCGGCCTG CGCGTCAAGA AGGAAACCAT CGGCGAAATC ACCGCCGCAG CGCAGGTCAT GCGCGAGTTC TCGACCAAGG TGCATGTCGC CGACAAGACC CATCTGGTCG ATATCGTCGG CACCGGCGGC GACGGCTCGC ACACCTTCAA CATCTCGACC TGCGCCATGT TCGTGGCGGC AAGCGCCGGC GCCCGGGTCA GCAAGCACGG CGGGCGCAGC GTCAGCAGCA AGTCGGGCAG CGCCGACGTG GTCGAGTCGC TGGGCATTTC GCTGAATCTG TCGCCCGAGG CGATTGCCCG CTGCATCGAG GAAGTGGGCG TCGGCTTCAT GTTCGCGCCC AACCACCATC CGGCCATGAA GAACGTCGCG CCGGTGCGCA AGGAACTCGG CATCCGCACC ATTTTCAACA TCCTCGGCCC GCTGACCAAT CCGGCCAGCG CACCGAACAT CCTGATGGGC GTGTTTCACC CCGACCTGGT CGGCATTCAG GTCCGCGCGC TGCAGCGCCT CGGGGCCGAG CACGCCCTGG TGGTGTACGG CAAGGACGGC ATGGACGAGG TCAGCCTGGG CGCGGCCACC GTGGTGGGCG AACTGAAGGA CGGTGAAATC ACCGAGTACG AAATCCATCC GGAAGACTTC GGCATTCCCA TGGCCAGCAA CCGCGCGCTG CGGGTTGAAA CGCCCGAGCA GTCCAAGGCC ATGCTGCTGG GCGTGCTCGA CAACCAGCCG GGCGCGCCGC GCGACATCGT GATCCTCAAT GCCGGCGCCG CGCTTTACGC CGCCAATGTG GTAAATTCAA TGAAAGACGG CATGGATCGG GCGCAAGCTG CTATTGAATC AGGAGCGGCC AGGCGGAAGC TGGCGCAACT CGCCGAGTTC AGCCAGTCCG CGTCCGGAGC CTGA
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Protein sequence | MADFLLPPSS PNTSPSRNPM PNSHKITASE ALQRTIEHRE IFHDEMLHIM RLIMSGEMSP LMTAALITGL RVKKETIGEI TAAAQVMREF STKVHVADKT HLVDIVGTGG DGSHTFNIST CAMFVAASAG ARVSKHGGRS VSSKSGSADV VESLGISLNL SPEAIARCIE EVGVGFMFAP NHHPAMKNVA PVRKELGIRT IFNILGPLTN PASAPNILMG VFHPDLVGIQ VRALQRLGAE HALVVYGKDG MDEVSLGAAT VVGELKDGEI TEYEIHPEDF GIPMASNRAL RVETPEQSKA MLLGVLDNQP GAPRDIVILN AGAALYAANV VNSMKDGMDR AQAAIESGAA RRKLAQLAEF SQSASGA
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