| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3642 |
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| Symbol | rplJ |
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| ID | 4687761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3878653 |
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| End bp | 3879204 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639836656 |
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| Product | 50S ribosomal protein L10 |
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| Protein accession | YP_983859 |
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| Protein GI | 121606530 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0244] Ribosomal protein L10 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.279713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAGTCTCA ATCGCAGTGA GAAACAAGCC GTCATTGATG AAGTGACAGG CCTCGCCGCT
AAAGCTCAAA CGCTCGTGAT GGCGGAATAC CGTGGCATCA CGGTCGCTGA CATGACCAAG
CTGCGCAGCC AAGCCCGCGA AAAAGGCGTG ACCCTGAGTG TTCTGAAGAA CACGCTGGCT
CGCCGTGCCG TGGCAGGTAG CGCATTTGAA GTCCTGTCCG ACCAGATGAC CGGTCCGCTG
ATCTACGGCT TTTCCATTGA TGCTGTCGCT GCTGCAAAAG TAGTGGCTGA CTTCGCAAAA
ACCAACGACA AGCTGGTGAT TCGCGCAGGT GCATTCGCTG GGAAAACCCT GGACGTCGAA
GGCGTTAAGC AACTGGCCAA CATTCCTTCC AAGGACGTAT TGCTGGCTCA GTTGTGTGGC
TTGCTGATGT CGCCTATTTC GCGTACCGCT GCTGTGCTTG CAGCGCTGTC CGCGCAACGA
GGCGCAGGCG TGGAAGAAGT TGCGGAGGCT GCAGAGCCCG CAGCTGAAGT CACAGAAGCC
GCAGCGGCGT AA
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| Protein sequence | MSLNRSEKQA VIDEVTGLAA KAQTLVMAEY RGITVADMTK LRSQAREKGV TLSVLKNTLA
RRAVAGSAFE VLSDQMTGPL IYGFSIDAVA AAKVVADFAK TNDKLVIRAG AFAGKTLDVE
GVKQLANIPS KDVLLAQLCG LLMSPISRTA AVLAALSAQR GAGVEEVAEA AEPAAEVTEA
AAA
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