Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3601 |
Symbol | |
ID | 4689999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3826704 |
End bp | 3829403 |
Gene Length | 2700 bp |
Protein Length | 899 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639836614 |
Product | osmosensitive K+ channel signal transduction histidine kinase |
Protein accession | YP_983818 |
Protein GI | 121606489 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCTAC CCGCCGGCCA GCGCCCCGAC CCCGACGAGC TGCTGCAACG GCTGCAGCAG CAGGAAGCGC AGCGTGCGCG CGGCAGGCTG CGCATCTATT TCGGCGCCAG CGCGGGCGTC GGCAAGACCT ACGCCATGCT CGGCGCCGCC CAGCGCGAGC GCAAGGACGG CCGTGACATC GTCGTCGGGG TGATCGAAAC CCACGGCCGC AGCGAAACCG CCGAACTGCT GGCCGGGCTG GAGCAGTTGC CGCTGCGCGA GGTCGCCTAC CGGGGCCGAA CGCTCAGGGA GTTTGACCTG GACGCCGCGC TGGCGCGCAA GCCGGCCGTG CTGCTGGTCG ATGAGCTGGC GCACAGCAAC GTGGAAGGCT CGCGCCACCC CAAGCGCTGG CAGGACGTGC AGGAACTGCT GGACGCCGGC ATCGATGTCT GGTCGGCCAT CAACGTGCAG CACCTGGAAA GCCTGAACGG CACGGTGGGC GCCATCACCG GCATCCGTGT CAACGAGACC GTACCCGACA CCGTGCTGGA CGCCGCCGAC GAGATCATCC TGGTCGATGT CACGCCCGAC GAACTGACGG CGCGCCTGAA GGCCGGCAAG GTTTATCTGC CGCAGCAGGC CGAGCGCGCG GCGCAGAACT TTTTCCGCAA GGGCAACCTG ATCGCGCTGC GCGAGATTGC CCTGCGCCGC ACCGCCGAGC ATGTCGAGGA CGATGTGCGC AGCTACCGGG TCGAGAAATC GATTTCCCCG GTGTGGAACA CCGAAGGCGC GCTGCTGGCC TGCATCGGCC CGCATGAAGG CGCCGAGCAG ACCGTGCGCA CGGCGGCGCG GCTGGCCGGC CAGCTCAATG TGCGCTGGCA TGCGGCGTAT GTCGAAACCC CGCGCCTGCA GCGGCTCAAG GAGGCCGAGC GCGACCGGAT TCTGGCCGTC ATCAAGCTGG CCGGCGAGCT GGGCGCGACT ACCGCCGTGC TGGCCGCCAG CGATGCGGCC GCCGAGCTGG TGGCGCAGGC GCAGGCGCTC AACTGCGCCA CGCTGGTGGT CGGGCGGCCC GCGCTGCCGG ACTGGCGAAC GCTGTGGAGC GGGCGCAGCA TGACGCGCCG GCTGGCCCGG CTGGCGCCCA CGCTGGACAT CGTGGAAGTG GCTGATGCCC GCAGCAGCCG GCGCCTGGCC CCGGCCGTGC CGCGCAGCGA CGACGACGCG GCCAGCGCCT GGCATGGCAG CCTGCCGCGC TATGCCTGGG CGGTGGCCAG CAGCGTGGCC ATCACGCTGC TGGCCACGCC GCTGCTCAAT GTGTTCGACC TGGCCAACAT CGTCATGCTG TTCCTGCTCG GCACGGTGCT GGTGGCGCTG AAGCTGGGGC GCGGCCCGGC GGCGCTGGCG GCGTTTCTCA ATGTCGCCGC GTTCGACTAT TTTTTCGTCG CGCCGCGCCT GTCGCTGGCG GTCAGCGACG TGCAGTATCT GGTGACGTTC GCCGTCATGC TGGTGGTCGG GTTGCTGACC GGCCAGTTGA CGGCGGGCCT GCGCTTTCAG GCGCGCATCT CAAGCAGCCG CGAGCGCCGC GCGCAGTCGC TGTTCGAGTT GACGCGCGAT TTGTCGGCGG CCCTGATGCC CTCGCAGGTG GCCGAGCTGG GCGAGGCCGC CGTGCAGCGC GACTTCGGCG GGCAGGCGCT GGTGCTGACC ACCGATGCCC GCGACCAGCT GGTGCTGCCG GTGCATGCGC CGCCGGGCTT TGACGCCAGC GTGGCCGACT GGGCGTTTCG CCATGCGCAG GCCGCCGGCC TGGCCACATC GACGCTGTCC GCGCAGACCT GGCATTACGT GCCGCTGAAG GCGACCATGC GGGTGCGCGG GGTACTCGCG CTGCAGCCCG CCAGGCCGCG CTGGCTGTTG ATTCCCGAGC AACTGCAGCA GCTCGACACG CTGGCGCGGC AAATCGCCAT CGCGCTGGAG CGCGTGCATT ACGTGGACAT TGCCCAGCAG GCAGTGGTCG AGATGGAGTC GGAGCGGCTG CGCAACACGC TGCTGGCGGC TCTTTCGCAC GATGTGCGCA CGCCGCTGAC GGCGCTGATC GGGCTGGCCG AGTCGCTGCA GCGCTCGCAG CCGCCGCTGG AGCCGCAGCA GGCCGGCATG GCGCAGGCGA TGGCGCAGCA GGCGCGCCAG CTCAATGCGC TGGTGAGCAA CCTGCTCGAC ATGGCGCGCC TGCAGAACGG CGCGGTCAGC CTGCACCGCG ACTGGCAGTC GGTCGAGGAG GTGGCCGGTT CGGCGATTCG CGCCGCCCAG CCCGCGCTCA ACGGCCGGAC GGTGCGCACC GACATCGCGC CGGACTTGCC GCTGGTCGAG TTTGACGCCG CGCTGATGGA GCGCGTGCTG GTCAACCTGC TGGAAAACGC CGCCAAGTAC GGCGCGCCGC CGTTTGAAAT CCATGCGCGC GCGGCGCCCG ACAGCCTGGT CTTGAGCGTG CGCGACCACG GGCCGGGGCT GCCACCCGCG CTGCGCGGCC GCGAGGCCGA ACTGTTCGAG AAATTCACCC GGGGCCAAGC TGAGTCCGCC ACGCCGGGCG TCGGGCTGGG GCTGGCGATT TGCAAGGCCA TCGTCGATGC GCATCGCGGA AAGATCGTGG CCGGCAATGC CCAAGGCGGC GGCGCGCAGT TCACCATCAC GCTGCCGCGC GGTTCGCCGC CCGAGCCGGC GCCGGAATAA
|
Protein sequence | MNLPAGQRPD PDELLQRLQQ QEAQRARGRL RIYFGASAGV GKTYAMLGAA QRERKDGRDI VVGVIETHGR SETAELLAGL EQLPLREVAY RGRTLREFDL DAALARKPAV LLVDELAHSN VEGSRHPKRW QDVQELLDAG IDVWSAINVQ HLESLNGTVG AITGIRVNET VPDTVLDAAD EIILVDVTPD ELTARLKAGK VYLPQQAERA AQNFFRKGNL IALREIALRR TAEHVEDDVR SYRVEKSISP VWNTEGALLA CIGPHEGAEQ TVRTAARLAG QLNVRWHAAY VETPRLQRLK EAERDRILAV IKLAGELGAT TAVLAASDAA AELVAQAQAL NCATLVVGRP ALPDWRTLWS GRSMTRRLAR LAPTLDIVEV ADARSSRRLA PAVPRSDDDA ASAWHGSLPR YAWAVASSVA ITLLATPLLN VFDLANIVML FLLGTVLVAL KLGRGPAALA AFLNVAAFDY FFVAPRLSLA VSDVQYLVTF AVMLVVGLLT GQLTAGLRFQ ARISSSRERR AQSLFELTRD LSAALMPSQV AELGEAAVQR DFGGQALVLT TDARDQLVLP VHAPPGFDAS VADWAFRHAQ AAGLATSTLS AQTWHYVPLK ATMRVRGVLA LQPARPRWLL IPEQLQQLDT LARQIAIALE RVHYVDIAQQ AVVEMESERL RNTLLAALSH DVRTPLTALI GLAESLQRSQ PPLEPQQAGM AQAMAQQARQ LNALVSNLLD MARLQNGAVS LHRDWQSVEE VAGSAIRAAQ PALNGRTVRT DIAPDLPLVE FDAALMERVL VNLLENAAKY GAPPFEIHAR AAPDSLVLSV RDHGPGLPPA LRGREAELFE KFTRGQAESA TPGVGLGLAI CKAIVDAHRG KIVAGNAQGG GAQFTITLPR GSPPEPAPE
|
| |