Gene Pnap_3583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3583 
Symbol 
ID4690149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3806480 
End bp3807514 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content66% 
IMG OID639836596 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_983800 
Protein GI121606471 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTCC CTTCCCTGAT TTCCCGCCGG CCGCTGCTGG CCTGGCTGGC CGCAAGCGCT 
GCAGCCATCC CATTTCCTGC TCTGGCCGCT GCGGCCGCGC AGCACCGCAA GCCCGCCACG
CTACTCACAG GCGCAGCGCT GATGGAGCGC GTCAACGCCG CCACCGACCT GCCTGTGCTG
GCGCAGGGCG CGCGCGGCGA GGCCGTGCTG CGGGCGCAGA TCCTGCTCGA CCACGCCTGG
TTCTCTCCGG GCGAGATCGA CGGCGCCTTT GGCGCCAACA TGCGCCGCAT GGTGGCGGCG
TTCCAGACGG CGAACGGCCA GAAATCAACC GGCCGCATCG ACGGCGAGAC CTGGAAAGCG
CTGGCGGGCG ACGCGCCTGC GCCGGTGCTG TCCGAATACA CCATCACTGC TGAAGATGCC
GCCGGCCCTT ATGCCAGGCT GCCAGCCGAC ATGATGAAGC GCGCGCAACT CAAGTCGCTG
GGCTATGAAA CCCTTCTGGA AGCGCTGGGC GAAAAATTCC ATTGCAGCCC GAAATGGCTG
CGCGATGCCA ACCGGGGCCA CACCTTCAAA GCCGGCGACA AGATCATTGT TCCGGCCCCA
GGTAGCGACA AGGCCCCGGC CGGGGCCGCG TCCATCCGCA TCGACAAATC CGAACATGTG
CTGTATCTGC TCGACAAGGC AGAGCGGCCA GTCGCCGCCT TCCCGATCAG CATGGGCGGC
GCATCGGACC CGCTGCCCAT CGGCCGCATG GAGATCAAGA ATGCCGCGAA AGACCCGGTG
TTCACCTTCA ACCCGGCGTT GCTCAAGGGC ACGAAGAAAA CCGACACCAA GGCCATCATT
CCTGCCGGAC CGAACAACCC GGTGGGCGTG TACTGGCTGG GCCTGAGCAA AGCGCACTGG
GGCATTCACG GCACACCCGA ACCGGAGCGC GTCGGCTCGT CCGAGTCCAA CGGCTGCATC
CACCTGACCA ACTGGGATGT GCTGCGCGTG GCGCAGGTCG TCAAACCCGG CTTTGCCGTG
GATGTTCATG CTTGA
 
Protein sequence
MPFPSLISRR PLLAWLAASA AAIPFPALAA AAAQHRKPAT LLTGAALMER VNAATDLPVL 
AQGARGEAVL RAQILLDHAW FSPGEIDGAF GANMRRMVAA FQTANGQKST GRIDGETWKA
LAGDAPAPVL SEYTITAEDA AGPYARLPAD MMKRAQLKSL GYETLLEALG EKFHCSPKWL
RDANRGHTFK AGDKIIVPAP GSDKAPAGAA SIRIDKSEHV LYLLDKAERP VAAFPISMGG
ASDPLPIGRM EIKNAAKDPV FTFNPALLKG TKKTDTKAII PAGPNNPVGV YWLGLSKAHW
GIHGTPEPER VGSSESNGCI HLTNWDVLRV AQVVKPGFAV DVHA