| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3562 |
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| Symbol | |
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| ID | 4687342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3783720 |
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| End bp | 3784322 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639836575 |
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| Product | D-alanyl-D-alanine dipeptidase |
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| Protein accession | YP_983779 |
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| Protein GI | 121606450 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2173] D-alanyl-D-alanine dipeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.271159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTAACC AGCCCCGACT GATCCACATC ACCGAGCAGA ACCATGATGT CCTGGTTGAC
CTGATCTATG CCGGTGCCAG CAACTTCACC GGCCAGGCCA TCTACGACCA TCCGCTGTGT
TTCTTGCACC CGCAGGCCGA AGCCGGTTTG CGCAAGGCCA TCGCGGCGGC GCGCGGTTTT
GGCCTGCGGC TGAAGATTCT CGACGCCTTC CGGCCGCAGG AGGCGCAGGA GGCCTTGTGG
GCCGTGGCGC CCAACCCGGA CTACATCGCC GACCCGAAAA TCGGCTCCAA CCACACGCGC
GGCGTGGCCG TTGACCTGAC GCTGGTCGGC GCCGATGGTG TGGCGCTCGA CATGGGAACG
CCGGTGGACA CCATGAGCGC GGCCTCGCAC CACTTTCATG CCGACCATCC GGCGGCCATC
CAGGTCAACC GCATGCGGCT GCTGACCGTC ATGCTGGAAG CCGGCTTCGT GCACCATCCG
CGCGAATGGT GGCATTACCA GTTGCCGGGC GCGGAGCGCT TTCCCCTGAT CGACAGCCAC
GCCTTCATGA CCTGCCTGCA CGCTGGCGGC CACGCGGCGA CTGCGGGTTC AATGGCTTCT
TGA
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| Protein sequence | MPNQPRLIHI TEQNHDVLVD LIYAGASNFT GQAIYDHPLC FLHPQAEAGL RKAIAAARGF
GLRLKILDAF RPQEAQEALW AVAPNPDYIA DPKIGSNHTR GVAVDLTLVG ADGVALDMGT
PVDTMSAASH HFHADHPAAI QVNRMRLLTV MLEAGFVHHP REWWHYQLPG AERFPLIDSH
AFMTCLHAGG HAATAGSMAS
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