Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3549 |
Symbol | |
ID | 4686537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3771296 |
End bp | 3772063 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639836562 |
Product | ABC transporter related |
Protein accession | YP_983766 |
Protein GI | 121606437 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAG CAAGCCTGCC GCTGATCCGC CTGCGCGGCA TCACCAAGAT GTATGGCGAA GGCGCGACCG CGCTGCTGGC GCTCAAAGGC GTCGATCTGG ACATAGCATC CGGCGATTTT GTCGCCATCA TGGGGCCGAG CGGATCGGGC AAATCGACCG CCATGAACAC GCTCGGCTGC CTGGACACGC CGACCTCGGG CGAATACCTG TTCCAGGGCG TGCATGTCGA GTCGCTCTCG CGCGACCAGC GCGCCCTGCT GCGGCGGCGC TTTTTCGGCT TTGTGTTCCA GGGCTTCAAC CTGCTGGCGC GCACCTCGGC GCAGGAAAAC GTCGAGCTGC CGCTGCTCTA CCGGGGCGAG GCCGCCGGCG CCCGCCACGC CAGCGCCGCC CGCGCGCTCG ACCAGGTGGG CCTGAAGGGC TGGGAGCACC ACCTGCCCTC CGAGTTGTCG GGCGGGCAGC AGCAGCGCGT GGCGATTGCG CGCGCCATCG TCACCCAGCC GGCGGTGCTG CTGGCCGACG AGCCGACCGG CAACCTCGAC ACCCAGCGCA GCCGCGAGAT CATGGAGTTG CTCTGGCGCC TGAACGCCGA CCAGGGCATC ACCGTGCTGA TGGTCACGCA CGAGCCCGAC ATGGCCGCCT ATGCGCGGCG CATCGTGCGC TTTGTCGATG GCCTGGTGGA AAGCGATGTG CGCAACGAGC ATCCCGCCGG ACTCGAACAT CCCGGCGCCG CCCTGCCCGT GGCCGCGCCC GTGGCGGAGG CCCGCTGA
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Protein sequence | MSEASLPLIR LRGITKMYGE GATALLALKG VDLDIASGDF VAIMGPSGSG KSTAMNTLGC LDTPTSGEYL FQGVHVESLS RDQRALLRRR FFGFVFQGFN LLARTSAQEN VELPLLYRGE AAGARHASAA RALDQVGLKG WEHHLPSELS GGQQQRVAIA RAIVTQPAVL LADEPTGNLD TQRSREIMEL LWRLNADQGI TVLMVTHEPD MAAYARRIVR FVDGLVESDV RNEHPAGLEH PGAALPVAAP VAEAR
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