| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3529 |
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| Symbol | |
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| ID | 4688055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3747586 |
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| End bp | 3748779 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639836543 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_983747 |
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| Protein GI | 121606418 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.042782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA ACGCTATCGC CTTCGCACTG GCCATCGGAT TTGCCGCTGC CGCATCCGCG
CAGGACACCG GTCCCGTCAA GATCGGCTTC ATCACCGACA TGTCCAGCCT GTATGCCGAC
ATCGACGGCC CGGCCGGCGG CGAAATGGTC AAGTGGGCGG TGCAGGATTT CGGCGGCAAG
GTGCTGAACC GCCCCATCGA AGTGCTGACC GCCGACCACC AGAACAAGGC CGACGTGGCC
AGCTCCAAAG CCCGGGAGTG GATCGACAAG GACGGCCTGT CCATGCTGAT CGGCGGCACC
AACTCGGGCA CGGCGCTGGC CATGGCCAAG ATCGCCGAGG AAAAGAAGCG CCCGTTCATG
GCCATTGGCC CCGGATCAGC CCGCCTGACC AATGAAGCCT GCTCGCCCTA CACCGTGCAT
TACGCCTACG ACACCGTGGC CCTGGCCAAG GTCGCTGGCA CGGCGCTGGT AAAGGCCGGC
AACAAGAACT GGTACTTCCT GACGGCTGAC TATGCCTTCG GCCACTCGCT GGAGGGCGAT
GCCTCCACCG TGGTCAAGGC CAACGGCGGC ACGGTCGTCG GCGCGGTACG CCACCCGCTC
AATGCGTCCG ACTTCTCTTC CTTCCTGCTG CAGGCCCAGA CCTCTAGGGC GCAGGTGCTG
GGGCTGGCCA ATGCGGGCGG CGACTTCACC AACGCGATGA AGGCGGCGCG GGAATTCGGC
ATCAACAAGA CCATGAAGAT CGCCGGCCTG CTGGTGTTCA TCAACGACGT GCACAGCCTG
GGCCTGGCCA ATACCGAGGG CCTGCAGCTG GCCGACAGCT GGTACTGGAA CCAGGATGAC
GCCTCGCGCA AATTCGCCAA GCGCTTCTTC GACAAGTACA AGCGCATGCC GTCGAGCCTG
CAGGCCGCCG ACTACTCGGT CGCCACCAAT TACCTCAAAG CCGTGCAAGC TGCCGGCACC
ACCGACGGCG ACAAGGTGAT GAGCGCGCTC AAGGGCATGA AGATCGACGA CTTCTACAAC
AAGGGCCAGA TCCGCGCCGA CGGCCGGATG ATCCACGACA TGTACCTGTA CCAGGTCAAG
TCGGCCAAGG AATCGACCGC ACCGTGGGAC TACTACAAGA TGGTTGCCAA GATCCCTGGC
GAGCAGGCGT TCACCACGCC AGCCGAGTCC AAGTGCGCAC TGATCAAGAA ATAA
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| Protein sequence | MKLNAIAFAL AIGFAAAASA QDTGPVKIGF ITDMSSLYAD IDGPAGGEMV KWAVQDFGGK
VLNRPIEVLT ADHQNKADVA SSKAREWIDK DGLSMLIGGT NSGTALAMAK IAEEKKRPFM
AIGPGSARLT NEACSPYTVH YAYDTVALAK VAGTALVKAG NKNWYFLTAD YAFGHSLEGD
ASTVVKANGG TVVGAVRHPL NASDFSSFLL QAQTSRAQVL GLANAGGDFT NAMKAAREFG
INKTMKIAGL LVFINDVHSL GLANTEGLQL ADSWYWNQDD ASRKFAKRFF DKYKRMPSSL
QAADYSVATN YLKAVQAAGT TDGDKVMSAL KGMKIDDFYN KGQIRADGRM IHDMYLYQVK
SAKESTAPWD YYKMVAKIPG EQAFTTPAES KCALIKK
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