Gene Pnap_3527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3527 
Symbol 
ID4689629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3746028 
End bp3746801 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content63% 
IMG OID639836541 
ProductABC transporter related 
Protein accessionYP_983745 
Protein GI121606416 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCAGTGG AGTTCATTCT TGAAACGCGA GGCTTGACCA AGGAATTCAA GGGATTCGTT 
GCCGTCAACA ACGTGGACCT GAAAGTCCAG CGCGGGCACA TTCATGCGCT GATCGGCCCC
AACGGCGCCG GCAAGACCAC CTTCTTCAAT CTGCTGACCA AGTTCCTGAC GCCCACGCGC
GGCAGCATCA CCTTCAACGG CAACGACATC ACCTTTGAAA AGCCGGCGCA AACCGCGCGG
CGCGGCATTG TCAGGTCGTT CCAGATTTCG GCGGTGTTCC CGCACATGAC GGTGCTTGAG
AACGTGCGCG CCGCCCTGCA GCGCAACCTG GGCACCTCGT TTCATTTCTG GAAGGCCGAG
GACACGCTCT ACCCGCTGCA CGACCGCGCG CGCGCCCTGC TCGACGAAGT TGATCTGGGC
CAGTTTGCCG ACATGCTGAC GGTGAACCTG CCCTACGGCC GCAAGCGCGC CCTGGAACTC
GCGACCACGC TGGCGCTGGA GCCCGAGCTG ATGCTGCTGG ACGAGCCCAC CCAGGGCATG
GGCCACGAGG ACGTGGACCG GGTCACGCAG CTGATCAAGA AGGTTTCCGC CGGCCGCACC
ATCTTGATGG TCGAGCACAA CATGAACGTG GTCTCCTCGA TTGCCAACCG CATCACGGTG
CTGCAGCGCG GCACCATCAT CGCCGACGGC CCGTATGCCG AGGTCTCGAA AAACCCGCTG
GTCATTGAAG CCTACATGGG CAACGCCGAC GCCGCCTTGC AGGGAGCCCA CTGA
 
Protein sequence
MPVEFILETR GLTKEFKGFV AVNNVDLKVQ RGHIHALIGP NGAGKTTFFN LLTKFLTPTR 
GSITFNGNDI TFEKPAQTAR RGIVRSFQIS AVFPHMTVLE NVRAALQRNL GTSFHFWKAE
DTLYPLHDRA RALLDEVDLG QFADMLTVNL PYGRKRALEL ATTLALEPEL MLLDEPTQGM
GHEDVDRVTQ LIKKVSAGRT ILMVEHNMNV VSSIANRITV LQRGTIIADG PYAEVSKNPL
VIEAYMGNAD AALQGAH