Gene Pnap_3526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3526 
Symbol 
ID4690107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3744722 
End bp3745837 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content63% 
IMG OID639836540 
Producthypothetical protein 
Protein accessionYP_983744 
Protein GI121606415 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGG TTTGTGGGTA TCAAGGGCTA TCCATAGGTA GCGTGGGAAA ACCGGCCCCT 
AAAATGCAGC GGATTGCGTT GTCCAAAATG GTGCGCGTCC CACTGAGCGC AGCCCGCTTG
GAAGCTTCAC AGGAAACCCT CATGTTCAAA AAGATTTTTT CATTCGCCCT GCTGGCGTGC
GCGCTGAGCG CCGTGCAGGC CCAGCCGCAA GCCGCCTCGT ACCCGGCCAA GCCAATCCGC
ATGATCGTGC CGTTCCCGCC GGGCGGCGGC ACCGACATCC TGTCGCGGCT GGTGGCCAAC
AAGCTCACTG AGGTCAGCAA GTGGACGGTG ATTCCCGACA ACCGGGGCGG CGCCGGCGGC
ACCATCGGCA TCGCCGAGGC TGCCAGAGCA GCGCCCACCG GCTACGAGAT GGTCATGGGC
CAGAAAGACA ACATGGTGGT GGCGCCCTGG CTGTACAAGA ACCTGAGCTA CGACCCGACC
AAAGACCTTG TGGCCGTGGC GCATGTGGCC TACACGCCAG TCGTGATTGT CACCAGCGTC
AACTCCCGAT TCAAGACGCT GGCCGACGTG GTGGCTACCG CCAAGGCCGC GCCCGACCAG
ATCACCTATG GCTCGCCGGG CAACGGCACG ACGATTCACC TGGCCGGCGA AATCTTCAAC
ACGGCGGCCC ACATCAAGCT GCGCCACATT CCCTACAAGG GCTCCAACCC GGCGATGATG
GACGTGCTGG CCGGCAACGT GGACCTGATG GTGTCGTCGC TGCCCTCGGC CATGGGCCAG
ATCAAGGCCG GCAAGCTGCG CGCCCTGGCG GTCACGTCGG CGCGCCGCAG CACCTCGATG
CCCGACGTGC CTACCGTGGC CGAGTCTGGC TACAAGGACT TTGACGTCAG CACCTGGTAC
GGCCTGTTCA TGCCGGCCGG AACGCCTGAA GGCATCGTCG CCACGGTGAA TGCCGAGGTC
AACAAGCTGC TGGCCACACC CGACATGAAG GCGGCCATCA ATGCCCAGGG CGCGGAAACG
CAAGTCATGA CATCCGCACA GTTTTCAGCG CTGCTCAAGA CCGATTACCA GAAATGGAAG
GGCATTGTGC AGGCCTCGGG GGCCACCATC GAGTAA
 
Protein sequence
METVCGYQGL SIGSVGKPAP KMQRIALSKM VRVPLSAARL EASQETLMFK KIFSFALLAC 
ALSAVQAQPQ AASYPAKPIR MIVPFPPGGG TDILSRLVAN KLTEVSKWTV IPDNRGGAGG
TIGIAEAARA APTGYEMVMG QKDNMVVAPW LYKNLSYDPT KDLVAVAHVA YTPVVIVTSV
NSRFKTLADV VATAKAAPDQ ITYGSPGNGT TIHLAGEIFN TAAHIKLRHI PYKGSNPAMM
DVLAGNVDLM VSSLPSAMGQ IKAGKLRALA VTSARRSTSM PDVPTVAESG YKDFDVSTWY
GLFMPAGTPE GIVATVNAEV NKLLATPDMK AAINAQGAET QVMTSAQFSA LLKTDYQKWK
GIVQASGATI E