Gene Pnap_3517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3517 
Symbol 
ID4687497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3732622 
End bp3733533 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content63% 
IMG OID639836531 
Producthypothetical protein 
Protein accessionYP_983735 
Protein GI121606406 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0765266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCAA AAGCTGCCGA TACCCCTTCC GCGCCGGATG CGCCCGCCAG CAAGGCCGAA 
CGCAAGGCGC TGTCCGATCT GATCTCCCGG TGGCAGCCTC CCCTGGCAGA GCCCGGCGCA
AACAACAAGA AAAGCAAGGC CTGCAGCCTG GACGATTTCG ACCCGGCTGC CAAGCCGTTC
TCGACCGGCG ACAAGGAACG CGACAAGGAA GCGGTCGAAG CGCTGGCCAT CGAGCTTGAC
ACGCTGCAAA ACCTGTTTTA CGCCGACCGT CGCCACAAGC TGCTGGTCAT TTTTCAGGGC
ACCGACACCT CGGGCAAGGA CGGCACGCTG CGCGGCGTGT TCAGCCGCAT GAGCCCGCTG
GGCGTGCATA CGGCGGCCTG GAAAGCGCCC AGCGAGGACG AGCGCGCACG CGACTACCTG
TGGCGCATCC ATCAAAAATT GCCGCCCGCC GGCGAGATCA TGATCTTCAA CCGCAGCCAC
TATGAAGACG TGCTGGTGCC GCCGGTCAAC GGCTGGATCA CGCCGGCGCA AACGGCGCAG
CGCTACCAGC AGATCAATGA TTTTGAACGC CTGCTCAGCG AGACCGGCAC GGTGATCCTG
AAGTTCATGC TGCACATCAG CTTCAAGGAG CAAGGCGAGC GGCTGCAGGA GCGCATTGAT
GACCCGACCA AGCGCTGGAA ATTTGCGCTG GGCGATCTGG ACGCGCGCAA GCAGTGGAAG
CAGTACCAGC AGGCGTATGA AGACCTGCTC AATGCCACCA GCACGCCCTG GGCGCCCTGG
ACGGTGGTGC CGGCCGACTC CAAGACGCAC CGCAACCTGA TGATTGCCAC GCTGGTGCGC
CAGAGCTTGC AGCAGCTTGA CCTGCGCTAC CCGCCCGATG ACCCGGCGCT CAAGGGCCTG
AAGGTCACCT GA
 
Protein sequence
MSSKAADTPS APDAPASKAE RKALSDLISR WQPPLAEPGA NNKKSKACSL DDFDPAAKPF 
STGDKERDKE AVEALAIELD TLQNLFYADR RHKLLVIFQG TDTSGKDGTL RGVFSRMSPL
GVHTAAWKAP SEDERARDYL WRIHQKLPPA GEIMIFNRSH YEDVLVPPVN GWITPAQTAQ
RYQQINDFER LLSETGTVIL KFMLHISFKE QGERLQERID DPTKRWKFAL GDLDARKQWK
QYQQAYEDLL NATSTPWAPW TVVPADSKTH RNLMIATLVR QSLQQLDLRY PPDDPALKGL
KVT