| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3502 |
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| Symbol | |
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| ID | 4687838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3716927 |
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| End bp | 3719350 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639836516 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_983720 |
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| Protein GI | 121606391 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.309689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCCCG AAGACAAACC CATGCAGGCG TCCATCACCG CCTCGCTTCT GGCTGGCGTG
CTGGAGTCCG CCATGGATGC CATCATCACG GTGGATGCGC AGCAAAACAT CGTGCTGTTC
AACCACGCGG CCGAAAAAAT GTTCGGCTGG AGCCGGCAGG AGGTCATGCA GCAGCCGCTC
GACAAGCTGA TTCCAGGGCG CTTTCGCCAC GCCCATGCCC GGCATCTTGC GCAGTTCGGC
GCCACGGGAG CGACGGTGCG GAGCATGGCG GACTCCCTCG TCCCTATCTA CGGGCTGCGC
GCCAACGGGC AGGAGTTTGC GGTTGACGTT TCCATCTCGC GGGTGGATAC GCCCGAAGGC
AAGCTGTTTA CCGCCATGGT GCGGGACATC ACCGGGCGCA AGCTGGCCGG ACAGGCCCTG
GTGGACAGCG AGCAGCGCTA TGCGGCCCTG TTTGCGTCGG CGCCGGTGCC GATGTGGGTG
ATTGACCGCG CGAGCCGAAA ATTCCTGACC GTCAACCAGG CCGCCATCGA AGGCTATGGC
CATTCGGCCG GCGAGTTCCT GTCGATGACG CTGCCGGACA TTCATGCCGA CGCCGAACGC
AGCTGTTTGC CCTATTACCT GGCTGACGCC GCGCAGAAGC GACAGGGTTC GTGCCAGCAT
CGCCGCAAGG ACGGCTCGCT TTTCAATGCC GATATCGTGG TCCGGCCGAT TCAGTACGCC
GGCCAGGAAG CTCTTTTCAT GGTGGCGCTG GACATGAGCG CCCAGGTCAA GGCTGAAAAA
GAGGTGCAGG ACCATTTGTT CACCTTGCAG CGCGCCGCCG ATGCGGCCCA GGCCATCACC
TGGCACCTGA CGCTGGACGG CATGATGCAG GAATTGGCGG AGCAGGCGCG CGGTGTGATC
GGCGCGCATC AGGCGGTGGT CAGCCTGGCC GCTGAACGTA AAGGCGGGCC GGGCGCTCAT
GCGCTGTCGC TGTCCGGCGA GTATGCGCAG TACCGCGACC AGCCGCTCTT GACCCACGGT
TTCGGGATCT ACGCCAAAGG CTGCCACGGC ACGCGCCCGG TGCGCATGGC GCAAACCGAG
TTGCAGGAGC ACGCGGACTG GTGCCGCGTG GGCAACCATG CCGACCGGGA GCGCATGCTC
AATGGCTGGC TGGCGGTGCC GCTGACTGGA CGCGATGGCC AGCCCATCGG GCTGCTGCAG
CTGTCGGACA AATACGAGGG TGAATTCATC CAGCAGGACG AGTATGTCGC GACCGAGCTG
GCGCAACTGG CGTCGATTGC CATTGTCAAC GTCCGCTTGC TGCATGAGGT CAGCCAGCTC
AATACCGGGC TGGAGAAAAA AGTGGCCGAG CGCACGCTGG CGCTGGCGCG CCAGGAGGCC
TTGTTCCGCG CACTGGCCGA GCAGGCGCCG CAAGTCATCT GGACTTTGGA CCCGAACGGC
GACGCGACCT ATTTCAACCA GGCCTGGTTT GACCTGGTCG GCGGCAGCCT GCGGGACTGG
AGCGGCAAGC AGTGGTTTGG CGCCGTTCAT CCCGATGACT TGCCCGACAC CAAGGCCAAC
TGGCAGCTTG CCCAGGCCAA CCAGCATTCC TTCTCCGGTC TCCGGCGCCT CTTGTGCAAG
GATGGCAGCG TCCACACCAT GGCTTACCGG GCCTCGCCCG TGCGCGGCGA AAAGGGCGTG
GCGGCCTTCT GGGTCGGCAT TGATGCGGAT GTGACCGAGA TCAAGCACAT CGAGGCCGCC
TTGCGCCTGT CGAACCAGGA GCTTGAAGCC TTTTCCTATT CGGTGTCGCA CGATCTGCGC
GCGCCGCTCA GCACCATCAA TGGCTTTGGC AGCCTGCTGG CCAAGCAGCT GGCGGGCGAT
GGAAACGACA AGATGCGGCA CTACGTGAGC CGCATACAGC AAGGCGTGGC GCAAATGGGC
CAGTTGATTG AAGACCTGTT GTCACTCGCG CAGGTGGCGC GCACGCAGGT GCGCAACGAG
CCGGTCGATC TGTCGGAAAT GGCGCTCGGC ATTCTGGACG CGTGGCGCGC CCGCCAGCCC
GAGCGCGAGG TGAATGTGCA GATTGAAAAT GACCTGCAAG CCTACGGCGA CAAGCCGCTG
CTCAGGGTGG TGATGGAAAA CCTGCTGGGC AATGCCTGGA AGTTCAGCGC GCACCAGCCA
CAGGCCACGA TCAGCGTCGG CCAGCAAGTC GATGCCGCGG GGTTGCCGGT ATTTTTCGTG
CGTGACAACG GGGCTGGATT CGACATGGCG CATGCCGAAA AGCTGTTTCT TCCGTTCGAG
CGCTTGCACG CGGCTTCGGA GTTTGCGGGA ACGGGCGTCG GGCTGGCCAC CGTCAGCCGC
GTGATCAACC GGCACGGCGG CAAGCTGTGG GCAGAGGCCG CACCCGGGCT TGGCGCGACT
TTTTTCTTCA CGCTTCACGG CTAG
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| Protein sequence | MMPEDKPMQA SITASLLAGV LESAMDAIIT VDAQQNIVLF NHAAEKMFGW SRQEVMQQPL
DKLIPGRFRH AHARHLAQFG ATGATVRSMA DSLVPIYGLR ANGQEFAVDV SISRVDTPEG
KLFTAMVRDI TGRKLAGQAL VDSEQRYAAL FASAPVPMWV IDRASRKFLT VNQAAIEGYG
HSAGEFLSMT LPDIHADAER SCLPYYLADA AQKRQGSCQH RRKDGSLFNA DIVVRPIQYA
GQEALFMVAL DMSAQVKAEK EVQDHLFTLQ RAADAAQAIT WHLTLDGMMQ ELAEQARGVI
GAHQAVVSLA AERKGGPGAH ALSLSGEYAQ YRDQPLLTHG FGIYAKGCHG TRPVRMAQTE
LQEHADWCRV GNHADRERML NGWLAVPLTG RDGQPIGLLQ LSDKYEGEFI QQDEYVATEL
AQLASIAIVN VRLLHEVSQL NTGLEKKVAE RTLALARQEA LFRALAEQAP QVIWTLDPNG
DATYFNQAWF DLVGGSLRDW SGKQWFGAVH PDDLPDTKAN WQLAQANQHS FSGLRRLLCK
DGSVHTMAYR ASPVRGEKGV AAFWVGIDAD VTEIKHIEAA LRLSNQELEA FSYSVSHDLR
APLSTINGFG SLLAKQLAGD GNDKMRHYVS RIQQGVAQMG QLIEDLLSLA QVARTQVRNE
PVDLSEMALG ILDAWRARQP EREVNVQIEN DLQAYGDKPL LRVVMENLLG NAWKFSAHQP
QATISVGQQV DAAGLPVFFV RDNGAGFDMA HAEKLFLPFE RLHAASEFAG TGVGLATVSR
VINRHGGKLW AEAAPGLGAT FFFTLHG
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