Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3496 |
Symbol | |
ID | 4688569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3710603 |
End bp | 3711274 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639836510 |
Product | TetR family transcriptional regulator |
Protein accession | YP_983714 |
Protein GI | 121606385 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.591625 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAAA AAGCGCCGCG CCGCACCGCA GAACGTATTC TGGAGGTCAC TCTGGAACTG TTCAACCGAT TTGGCGAGCC CAATGTCTCC ACCACGCTGA TTTCCGCCGA ACTCGGCATC AGCCCGGGCA ACCTCTACTA CCACTACCCC GCCAAGGACG AGTTGATCAA CTCGCTGTTC GACCGCTATG AGCAGGCCCT GAACGAGCTG CTCAATGCCA GCGACGGTGT GCGCCATGTC GAAGATGCCT GGTTTTTCAT GCACACGCTG TTTGAACTGA TCTGGCAGTA CCGCTTTTTG TACCGCGACC TGAACGATCT GCTGAGCAAG AACCGCCGGC TCGAAACCCA TTTCCAGGGG GTGCTCAAGA ACAAGGCCCG CGCCGTCAGG GCATTGCTCG ACGGCATGGG CCGGGCCGGC GCCATGACGA TGGACTCGCG CGAAGTCGAG GCGACGGCCA CCAGCATGGT GGTGCTGCTG ACCTACTGGC TGAGCTTTGA ATATGTGCGC AATCCGCGCC ATGCGCTGGA GCCGGCCCAT GCGCAGTCCG CGCTGCTGCG CGGCGCGCAC CACGTGCTGA GCCTGCTGGC GCCCTATCTG GAGCCGGGCG AGCGCAGCCA TCTGCAGAGC CTGGCCGCCG CCTACAGCAG CCCGGCAAGC CTGCCGGCCT GA
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Protein sequence | MAKKAPRRTA ERILEVTLEL FNRFGEPNVS TTLISAELGI SPGNLYYHYP AKDELINSLF DRYEQALNEL LNASDGVRHV EDAWFFMHTL FELIWQYRFL YRDLNDLLSK NRRLETHFQG VLKNKARAVR ALLDGMGRAG AMTMDSREVE ATATSMVVLL TYWLSFEYVR NPRHALEPAH AQSALLRGAH HVLSLLAPYL EPGERSHLQS LAAAYSSPAS LPA
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