Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3489 |
Symbol | |
ID | 4689150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3703007 |
End bp | 3703894 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639836503 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_983707 |
Protein GI | 121606378 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.374251 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAAC GCAAAGGCAT CATCCTCGCC GGCGGCTCCG GCACCCGGCT GCACCCGGCA ACGTTGGCCA TCAGCAAGCA ACTGCTGCCG GTGTACGACA AGCCCATGAT CTACTATCCG CTGAGCACCT TGATGCTGGC CGGCATCCGC GACGTGCTGG TCATCAGCAC CCCGCAGGAC ACGCCGCGCT TTACCCAACT GCTGGGCGAC GGCAGCCAGT GGGGCATGAA TTTGCAATAC GCCGTGCAGC CTAGCCCCGA CGGCCTGGCG CAGGCCTTTT TGATTGGCGA GGACTTCATC GGCAATGCGC CCAGCGCCCT GGTGCTGGGC GACAACATCT TTCATGGCCA TGATTTTTCG CAGCTGATGG CCGGCGCGGA CGCCCAGGCG CAAGGCGCCA CGGTGTTTGC CTACCATGTG CGCGATCCCG AGCGCTATGG CGTCGTGTCT TTTGATGCCG CCGGCAAAGC CAGCAGCATT GAGGAAAAGC CGCTCCAGCC CAAGAGCAGC TATGCCGTCA CCGGCCTGTA TTTCTACGAC AACCAGGTGG TCGATGTTGC CAAGTCCATC CAGCCCAGCG CCCGGGGCGA GCTGGAGATC ACCACGGTCA ACCAGTTCTA CCTGGAACAA GGCAGCTTGA GAGTGCAGAT CATGAAGCGC GGTTACGCCT GGCTTGACAC CGGCACGCAT GAAAGCCTGC TCGAAGCGGG CTCCTTCATC GCCACGCTGG AGCATCGCCA GGGCCTGAAG GTGGCCTGTC TTGAGGAAAT CTCATGGCGG CAGAAGTGGA TTACTTCAGA GCAACTTGAA CAACTCGCCC AGCCGCTTGC GAAGAACGGT TATGGCCAGT ATTTGCTGCG CCTGCTGGCT GAAGGCCCCC GGCCATGA
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Protein sequence | MTQRKGIILA GGSGTRLHPA TLAISKQLLP VYDKPMIYYP LSTLMLAGIR DVLVISTPQD TPRFTQLLGD GSQWGMNLQY AVQPSPDGLA QAFLIGEDFI GNAPSALVLG DNIFHGHDFS QLMAGADAQA QGATVFAYHV RDPERYGVVS FDAAGKASSI EEKPLQPKSS YAVTGLYFYD NQVVDVAKSI QPSARGELEI TTVNQFYLEQ GSLRVQIMKR GYAWLDTGTH ESLLEAGSFI ATLEHRQGLK VACLEEISWR QKWITSEQLE QLAQPLAKNG YGQYLLRLLA EGPRP
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