| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3488 |
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| Symbol | |
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| ID | 4689141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3702465 |
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| End bp | 3703010 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639836502 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_983706 |
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| Protein GI | 121606377 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.368105 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTAA TACCCACGGC GATTGCCGAC GTTCTGATCA TCGAGCCCAG GGTATTTGGC
GATGCGCGCG GTTTCTTTTA TGAAAGCTTC AACCAGAAGG CGTTCAACGA CGCTACCGGG
ACCGATCACC AGTTCGTGCA GGACAACCAC AGTCGCAGCG TCAAGGGCGT CATGCGCGGT
CTGCATTACC AGGTCCAGCA ACCGCAGGGT AAGCTGGTGC GTGTGGCGCG CGGGGCTGTC
TTTGATGTCG CGGTGGATAT TCGCAAGAGT TCGCCGACGT TCGGAAAATG GGTGGGCGTG
GAACTGAGCG AAGACAACCA CCGGCAGCTG TGGGTGCCGC CGGGTTTTGC GCACGGGTTC
GTGGTGACCA GCGAATCGGC TGATTTCCTG TACAAGACGA CCGATTACTA TGCGCCTGAG
TTTGAGCGCT GCATTGCGTG GAATGATTCA GTTATTGGTA TTCAATGGCC GCTGGCCCCG
CACGGCATCG CACAGCCTGT ACTTTCTGCC AAGGATTTGC AGGGTAAAAG TTTGAGCGAA
GCCTGA
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| Protein sequence | MKVIPTAIAD VLIIEPRVFG DARGFFYESF NQKAFNDATG TDHQFVQDNH SRSVKGVMRG
LHYQVQQPQG KLVRVARGAV FDVAVDIRKS SPTFGKWVGV ELSEDNHRQL WVPPGFAHGF
VVTSESADFL YKTTDYYAPE FERCIAWNDS VIGIQWPLAP HGIAQPVLSA KDLQGKSLSE
A
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