Gene Pnap_3461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3461 
Symbol 
ID4687113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3672511 
End bp3672897 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content51% 
IMG OID639836475 
Productregulatory protein, MerR 
Protein accessionYP_983679 
Protein GI121606350 
COG category[L] Replication, recombination and repair 
COG ID[COG2452] Predicted site-specific integrase-resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTAGGA TGAGCGATTA CCGCATCAAT GAATTTGCAA AACGAGTCGG TCGTTCGGTT 
CAAACCATTC GTCGTTCGGA GCGTGAGGGA AAGTTGACAG CGAAACGGCT GCCGTCAGGT
CATCGGTATT TTGATGCATC TGAGGTGCGT TCGCTGATGG GTGGTACAAC GGATAAAAAA
GACATCGTGG TCTATTGCAG TGTCAGCGGC GCTGGCCAAA AAGATGACCT TGCCTCACAA
GTCGCAGCCA TGCAGGCGTA CTACCTTGCG GACGCCATCG TTCACACTTT CAGCTGCAGG
CTTGACGGCA TGCGCAAATA CAAGCAGGTC ATCAAGGAAG ATTTTCCCCA GTTTCAACTA
GGCGTCGTGA AGGACGAATT GCAATGA
 
Protein sequence
MSRMSDYRIN EFAKRVGRSV QTIRRSEREG KLTAKRLPSG HRYFDASEVR SLMGGTTDKK 
DIVVYCSVSG AGQKDDLASQ VAAMQAYYLA DAIVHTFSCR LDGMRKYKQV IKEDFPQFQL
GVVKDELQ