Gene Pnap_3423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3423 
Symbol 
ID4689295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3631051 
End bp3632787 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content61% 
IMG OID639836437 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_983641 
Protein GI121606312 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.890377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA AAAGCGTTCT CTACACCTCA AGCCCCTTGC TGGCCAGCAA AACGCCTGTC 
TGGCGCAGCA AGCTCATCGT GGCTCTGATT GCGCTGTTGT TTACAGGTCT GGCCATCAGG
GCGGCCTATA TCCAGGTGTA TGCCAACGCA TTTTTCCAGC GGCAGGGCCA GGTGCGGTTT
GCACGGACCC TGGAGTTGCC CGCCAACCGG GGCCGCATCC TGGACCGCAA TGGGCTGATT
CTGGCCTCCA GCGTGCCCGC CTCCAGCATC TGGGCCATTC CTGAAGATGT CAAGGCCAGT
CCCGCCCAGC TTGCCGAACT CGCCAAATTG CTTGAAATGC CCCTGGCCGA GCTGAACAAG
AAGCTCGGCG ACGAGGACAA GACTTTTGTC TGGGTCAAGC GCCAGCTTGA AGAACCGGTC
GCCCAGAAAA TCCATGCGCT CGGCATTCCC GGCATTTACC AGCGCAAGGA ATACAAGCGC
AAATATCCCG AAGGTGAAAC CATCGCGCAC ATCGTCGGTT TCACCAACGT GGAAGACAAG
GGCCAGGAAG GCATCGAGCT GACCTTCAAT AAAGAGCTTT CAGGCAAGGC CGGCTCACGG
CGCGTCATCA AGGACCGGCT GGGCCGCGTG GTCGAAGGCG TCGGCGAGCA GGTTCCGCCG
GTTGACGGAA AAGACATCCA GCTCAGCGTT GACAGCAAGG TGCAGTTTTT TGCCTATCAG
AAGTTGCGTG ATGCGGTGAT CGCGCGCAAG GCCAAGGCCG GCAGCGTGGT GGTGATTGAT
TCCATCACTG GCGAGGTGCT GGCGCTGGCC AATTATCCAA GCTATGTGCC TGACAAGCGC
CAGAACCTGA CCGGCGAGCA ACTGCGCAAC CGGGCGGTGA CTGACACCTT CGAGCCCGGC
TCAACGATGA AGCCCATCAC TGTGGCCATG GCGCTGGAGG CTGGCCGCAT CAAGCCGCAG
ACCCTGATTG AAACCGGCCC CGGCCGCTTT AGCATCGGTG GCTTCACCAT CAGCGACACC
CACAACTACG GCACCTTGAC CGTCGAGGGT GTGATCCAGA AGTCCAGCAA TGTTGGCGCG
CTGAAAATCG CGCAGAAGAT GACGCCGCAC GAGATGTGGG ATACCTATGT GGCCCTCGGC
TACGGCCAGA AACCCAAGAT CGAGTTTCCC GGTGCGGTGT CGGGCCGGCT GCGGCCCTGG
AAGACCTGGC GGCCGGTTGA GCAGGCCACC ATGGCTTATG GCTACGGACT GTCGGCCTCG
CTGTTCCAGA TGGCGCATTC CTACACCTCT TTTGCCCACG ACGGCCAGAT CATTCCGGCC
ACCATGCTCA AGAGAAGTGA GCCCGCTGTC GGCGTCAAGG TATTTTCTCC AGAAAATGCG
CGCGCCGTGC GCCGGATGCT CCAGATGGCG GCAGCACCAG GCGGCACGGG CCAGCTTGCC
CAGACCGTCG GCTACTCGGT CGGCGGCAAG TCGGGCACAG CGCACAAGCA GGTCGGCAAA
GGCTATGCCA GCAACAAATA CCGCGCCTGG TTTACCGGCA TGGCACCGAT TGAATCGCCG
CGCATCATCG TCGGCGTCAT GATCGACGAG CCGAGCGATG GCAAATACTT CGGCGGCATT
GCCGCCGCGC CGGTGTTCAG CGAAGTGGTT CAGCAGACGC TGCGCATGAT GGGCGTGCAG
CCCGACGTGA GCGTGAAACC GCAAATCATC ACGCAGACGG TGGAGGAGTC GTTTTGA
 
Protein sequence
MSSKSVLYTS SPLLASKTPV WRSKLIVALI ALLFTGLAIR AAYIQVYANA FFQRQGQVRF 
ARTLELPANR GRILDRNGLI LASSVPASSI WAIPEDVKAS PAQLAELAKL LEMPLAELNK
KLGDEDKTFV WVKRQLEEPV AQKIHALGIP GIYQRKEYKR KYPEGETIAH IVGFTNVEDK
GQEGIELTFN KELSGKAGSR RVIKDRLGRV VEGVGEQVPP VDGKDIQLSV DSKVQFFAYQ
KLRDAVIARK AKAGSVVVID SITGEVLALA NYPSYVPDKR QNLTGEQLRN RAVTDTFEPG
STMKPITVAM ALEAGRIKPQ TLIETGPGRF SIGGFTISDT HNYGTLTVEG VIQKSSNVGA
LKIAQKMTPH EMWDTYVALG YGQKPKIEFP GAVSGRLRPW KTWRPVEQAT MAYGYGLSAS
LFQMAHSYTS FAHDGQIIPA TMLKRSEPAV GVKVFSPENA RAVRRMLQMA AAPGGTGQLA
QTVGYSVGGK SGTAHKQVGK GYASNKYRAW FTGMAPIESP RIIVGVMIDE PSDGKYFGGI
AAAPVFSEVV QQTLRMMGVQ PDVSVKPQII TQTVEESF