| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3411 |
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| Symbol | lpxC |
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| ID | 4688267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3616303 |
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| End bp | 3617226 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639836425 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_983629 |
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| Protein GI | 121606300 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000120521 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.205011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCGCTC AAAGAACTCT CAAATCCCTG ACCAAGGCGG TTGGCGTCGG GCTGCACAGC
GGCCAGCGGG TCGAGTTGAC CCTGCGGCCA GCGCCTCCCG ATAGCGGCAT CGTGTTCCGG
CGCGTCGATT TGCCGGAGCC GGTCGATATC GTCATCTCGC CCGAAGCCGT GACCGACACC
CGGCTGGCAT CGACCATTTC CAGCGGCAGC GCCAAGGTCC ACACCGTCGA GCACCTGATG
TCGGCCTGCG CCGGCCTGGG GCTGGACAAC CTGATCATCG ACATCACCGC CGAAGAAGTG
CCGATTCTGG ACGGCTCGGC GTCCTCGTTC GTGTTTTTGC TGCAGTCCGC CGGCATTGCG
CTGCAGGACG CGCCCAAGCG TTTTGTGCGC ATCCTCAAGC CCGTCGAGGT CCGCGAAGGC
GAGGGCGCCA ATGTGAAGTG GGCGCGCCTG AGCCCTTACG AGGGCTACAA GCTGAGCTTT
GAAATCGACT TCGACCATCC CGCCGTGGAT TCCACCGGCC AGCGCGTCGA GTTCGACATG
GGCTCGGGCG GCTACAGCCG GGACATCGCC CGGGCGCGCA CCTTCGGCTT CACCAAGGAT
GTCGAAATGA TGCGGGCCAA CGGACTGGCG CTGGGCGGCG GGCTCGACAA CGCCATCGTC
ATGGACGACT ACAAGGTGCT CAACAGCGAA GGCCTGCGCT ACAACGACGA ATTCGTGAAG
CACAAGATCC TCGATGCCAT GGGCGACCTG TACCTGCTGG GCAAGCCGCT GCTGGCCGCC
TACAGCGCGT TTCGCTCGGG CCACGCCATG AACAACAAGC TGCTGCGCGA GTTGCAGGCC
CATCCCGAGG CCTACGAAAT CGTCACCTTC GACGACGAAA AAAGCGCTCC CAAGGGTTTT
TCAACCCTGC CGCGCGCCTG GTAA
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| Protein sequence | MLAQRTLKSL TKAVGVGLHS GQRVELTLRP APPDSGIVFR RVDLPEPVDI VISPEAVTDT
RLASTISSGS AKVHTVEHLM SACAGLGLDN LIIDITAEEV PILDGSASSF VFLLQSAGIA
LQDAPKRFVR ILKPVEVREG EGANVKWARL SPYEGYKLSF EIDFDHPAVD STGQRVEFDM
GSGGYSRDIA RARTFGFTKD VEMMRANGLA LGGGLDNAIV MDDYKVLNSE GLRYNDEFVK
HKILDAMGDL YLLGKPLLAA YSAFRSGHAM NNKLLRELQA HPEAYEIVTF DDEKSAPKGF
STLPRAW
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