| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3401 |
|---|
| Symbol | |
|---|
| ID | 4686877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 3607693 |
|---|
| End bp | 3608277 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639836415 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_983619 |
|---|
| Protein GI | 121606290 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3150] Predicted esterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.435883 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.57421 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATCA CCCACCTGCT CTACCTGCAC GGCTTTCGCT CTTCCCCCCA ATCGGCCAAG
GCCCAAAAAA TGGCCGCCCT GATGGCTGAA CGCCACCCGG CGGTGCGCTG GTGGTGCCCG
CAACTGCCGC CCTCGCCGCA AGAGGCCATG GCGCGGCTTC AAGCCGGCAT CGCGGACTGG
CCGGCCGAAT CCATGGCCGT CATCGGCTCC TCGCTGGGCG GTTTCTACGC GACGGCGGTC
GCCGAGCGCC AGGGCTGCAA GGCCGTGCTG CTGAACCCGG CGGTCGATCC GGCGCGTGAC
CTGGCGAGCT ACATCGGCGA GCAAACCACC TGGCAGAACC CCGGCGAGCA CTTTTTCTTT
GAAGCGCGCT TTGTCGATGA ACTGCGCGCG CTGCAGGCGG GGCCGCTGAA GGTTCCGCAC
AACTACCTGG CCATCATCGC CAGGGGCGAC GAAGTGCTGG ACTGGCGCGA GATGGCGGCG
CGATATGCGG GCGCTAGAGT GCGCCTGCTC GAAGGCGGCG ACCATGCGCT GAGCGACTTC
GACGCGCACC TGCCGCTGAT CTTGGACTTT CTGCGCCTGG CCTGA
|
|---|
| Protein sequence | MPITHLLYLH GFRSSPQSAK AQKMAALMAE RHPAVRWWCP QLPPSPQEAM ARLQAGIADW
PAESMAVIGS SLGGFYATAV AERQGCKAVL LNPAVDPARD LASYIGEQTT WQNPGEHFFF
EARFVDELRA LQAGPLKVPH NYLAIIARGD EVLDWREMAA RYAGARVRLL EGGDHALSDF
DAHLPLILDF LRLA
|
|---|
| |