Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3390 |
Symbol | prmA |
ID | 4689604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3595542 |
End bp | 3596435 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639836404 |
Product | ribosomal protein L11 methyltransferase |
Protein accession | YP_983608 |
Protein GI | 121606279 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2264] Ribosomal protein L11 methylase |
TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.375634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTTTG AATTAATCTT GTTAGCCCCT GTCGTCCAGG TGGAAACCCT CAGCGACGCG CTCGATGCCC TGGATGCGCT CAGCGTCTCG GTCGAAGACG CCGACGCGCA CACCCCGGCT GAGCAGGCCC TGTTCGGCGA ACCCGGCATG CCGCCGCCCA AGGCCGGCTG GGAGCGCTCG CGCATCGTGG CGCTGTTTGC CACCGAAGCG CTGGCGCGCG ATGCGGCCAC GCTGCTGCAG GCCCAGGATT TCTTTGCCGG CTGCCATGTG GTCGCGATTC AGGCCGTGCC CGAGCAGGAC TGGGTCCGGC TGACGCAGTC GCAGTTCACG CCGGTCGAGA TCACGCCCGA ATTCTGGATC GTGCCGACCT GGCATGAGCC GCCGGCGCAG GCCCGGCAGG TGATCCGGCT CGACCCGGGC CTGGCCTTTG GCACCGGCAC CCATCCGACG ACGCGCATGT GCCTGCGCTG GATTGCGGCG CGGGGCACGT CAGGCCAGTC GCTGGGCCGC GTGCTCGACT ACGGCTGCGG CTCCGGCATC CTGGCGATTG GCGCGGCCAA GTTTGGCGCG GTGGCGATTG ACGCGGTCGA TATCGACGAG GCCGCTGTTG AATCGACCCG CGCCAATGCC CAGGCCAACC ATGTGCAGCT GCAGACCGGC CTGCCCGACA AGGCCGTGGG CCGCTACCAG ACGGTGCTGG CCAACATCCT GGCAACGCCT TTGCGCGTGC TGGCGCCGCT GCTGTGCGCG CATGTCCAGC CGGGCGGCAA CCTGGTGCTG GCAGGTATTC TGGAGCGCCA GGCCGATGAG CTGAAGGCTG CGTACCTGCC TTATTGCCAG CTCCAGGTCC AGGACGAGCA AGAAGGCTGG ATCCTGATGA CCGCGCAGTT TTGA
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Protein sequence | MMFELILLAP VVQVETLSDA LDALDALSVS VEDADAHTPA EQALFGEPGM PPPKAGWERS RIVALFATEA LARDAATLLQ AQDFFAGCHV VAIQAVPEQD WVRLTQSQFT PVEITPEFWI VPTWHEPPAQ ARQVIRLDPG LAFGTGTHPT TRMCLRWIAA RGTSGQSLGR VLDYGCGSGI LAIGAAKFGA VAIDAVDIDE AAVESTRANA QANHVQLQTG LPDKAVGRYQ TVLANILATP LRVLAPLLCA HVQPGGNLVL AGILERQADE LKAAYLPYCQ LQVQDEQEGW ILMTAQF
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