| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3383 |
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| Symbol | |
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| ID | 4689984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3585996 |
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| End bp | 3587423 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639836397 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_983601 |
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| Protein GI | 121606272 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.542066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGC AAGCACCTGC ATTACTACCT GCCCGCATCC TGATCATTGA TGACGAGCCG
GACCTGCGCA CCCTGTACGA GCTGACGCTG CTTCGGCAAG GCTACCGGGT CGAGGCGGCC
GGAGATCTGC AGCAGGCGCG CGAACACCTC AAGGCGCAGC GTTTTGATGC CGTCATCACC
GACATGCGCC TGCCCGACGG GCTGGGGCTT GAACTGCTGC GCGACCTGGC GGCACAGCAC
CGTTCGGAGC GCTGCGTGGT CATCACGGCC CATGGCTCGG CCGAAAATGC GGTGGAGGCG
CTCAAGGCAG GCGCGTTTGA CTACCTGACC AAGCCGGTTG ACCTCAAGCA GTTCCGAAGT
GTCGTGGCCT CGGCCATACA GGAAACCACC AATCTCGGTG TGGCTCTGCC GAAGGGCGAA
GCCCGCATGG CGATGACCAG CCCTGGCAAA CCGGCCGATG CCGCAACCAT GCTGCAAAAG
CTGGTCGGCG AATCGCCCGT GATGCGGGCC GTGAAGTCGC GCATCGTCAA GGTGGCCGGC
AGCATGGCGC CGGTGCTGAT ACGCGGCGAG TCCGGCACCG GCAAGGAACT GGTGGCGCGC
GCCGTGCATG GCTGCAGCCA TCGCGCGGCC AGCCCGTTCG TGGCGGTCAA CTGCAGTGCG
ATTCCCGAAA ACCTGCTTGA AGCCGAGTTC TTTGGCGCCC GCAAAGGTGC TTACACCGGC
GCAGCGCAGG ACCGGCAGGG CTATTTCCAG GCGGCCAAGG GCGGCACGCT GTTTCTTGAC
GAGATTGGCG ACCTGCCGCT GGCCATGCAG TCCAAGCTGC TGCGGGCCAT CCAGGAGCGC
ACCGTGCGTT CGCTGGGCTC GCCGCAGGAA GAAACCGTCG ATGTGCGCAT CGTCAGCGCC
ACCCACAAGG ACTTGGCGGC AGGCGTCGAG GCGGGTACCT TTCGCCAGGA TTTGTACTAC
CGGCTCAATG TGATCGAGGT CGTGGTGCCG CCACTGCGCG AGCGGCTGGA CGACCTGCCG
GCACTGTGCA ACGCCCTGCT GGCAAGAATT TGCAATGAGT CCGGCCTGGA CATGCCCGAG
TTGAGCCCGG CGGTGATCGC GCAACTGCGT TCGCTGCCCC TCAACGGCAA CGTCCGCGAA
CTGGAGAACA TCCTGCACCG GGCCGTCGCC CTGGGCGAAG ACAGCCTGCT GCAGGTTGAT
GCGCCGCCCG AGGAGGTGGT GGTCGTACCC GAGAATCTGC AAAACTTCCT GGACCAGCAG
GAGCGCAGCA TCCTGACCAA GGTGCTGCAG GAAACCGGCT TCAACCGCAC GGCTGCAGCC
ACCCGGCTGG GCCTGAGCCT GCGCCAGATC CGCTACCGTA TTGCGCGCCT GGGAATCACG
ACACCCGGCC ATGACGATGC GGCCGAGACC CTTGATGACT TTGCCTGA
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| Protein sequence | MNPQAPALLP ARILIIDDEP DLRTLYELTL LRQGYRVEAA GDLQQAREHL KAQRFDAVIT
DMRLPDGLGL ELLRDLAAQH RSERCVVITA HGSAENAVEA LKAGAFDYLT KPVDLKQFRS
VVASAIQETT NLGVALPKGE ARMAMTSPGK PADAATMLQK LVGESPVMRA VKSRIVKVAG
SMAPVLIRGE SGTGKELVAR AVHGCSHRAA SPFVAVNCSA IPENLLEAEF FGARKGAYTG
AAQDRQGYFQ AAKGGTLFLD EIGDLPLAMQ SKLLRAIQER TVRSLGSPQE ETVDVRIVSA
THKDLAAGVE AGTFRQDLYY RLNVIEVVVP PLRERLDDLP ALCNALLARI CNESGLDMPE
LSPAVIAQLR SLPLNGNVRE LENILHRAVA LGEDSLLQVD APPEEVVVVP ENLQNFLDQQ
ERSILTKVLQ ETGFNRTAAA TRLGLSLRQI RYRIARLGIT TPGHDDAAET LDDFA
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