| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3374 |
|---|
| Symbol | |
|---|
| ID | 4689800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 3574388 |
|---|
| End bp | 3575851 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639836388 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_983592 |
|---|
| Protein GI | 121606263 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGGCCTA AGCCCGCCGC CTTGCGCCCA ACCCCCAAGC CCATGCTGCA GCGGTTTTCG
TTCCGGCAGT TGCTGGTGAT TGCCTTCCTG CTGATTGCCG TGCTGCTGGG CGCCGCGTCG
CTGCGCGCGC TGTTCGCGCT GCAGGACCTG ACCGTGCAAA GCCGCGACAA CGCGGCGCGC
GCGCTCGACC TGAGCGGCGC GGCGCAGTCG CTGCGCGAGC GCAGCCTGTC GATGGAGCGC
AGCTCGCGGC AGTCGGTGGT GCTCGATGAC CGCGTCCTGC GGCAACGCTT CCGGGACGAA
GCCCGCGATG CGACCAGCAT CCTCACCCGC CTGGCCCGCG AAGACATTCC CGCCGCGAAG
GCGCAGCCGT GGCGCACGCA CCTGGACACC ATGCTGGACC TGCTGACCGG CCCGCCGGAC
ACCGCGCTGG AGCGCGAACA CCAGCTGACG CAGGAATTTC GCGAACTCGA AGGCATCAAT
ACCGCCATTG CCATGCAGGT GCAGCAAACC ATCCAGCAGC GCAACCAGTC GCTGCAGGAA
AAGTTAGAGA CCAGCCGCCA GCACCTGGCG CAGCAGGTGA CCTGGGCCAT CGTGCTGACC
GTCTTCATGG CGCTGGCCTT CGGCGTGTGG TTCACCCGGC CCCTGAAGCG GCTGGAAAAC
GCCATCATCG GCCTGGGCGA AAACCGGCTC GACCAGGTGA TTGCCATCCA CGGCCCGGCC
GACCTGGCGC TGGTCGGCGA GCGGCTGAAC TGGCTGCGGC TGCGCCTTAG CGAACTCGAC
GCCGACAAGT CGCGCTTTTT GCGCCACATC TCGCATGAAC TCAAAACCCC GCTGGCCTCG
CTGCGCGAAG GCGTGTCGCT GCTGGAAGAC GGCGTGGCCG GTCCGCTGAG CCACGACCAG
CGCGAAATCG CCCAGATCCT CAAGCACAAC ACCGGCGTGC TGCAAAGCCA GATCGAGGAC
CTGCTGCGCT TCAACACGGC GGCTTTCGAG GCGCGCCAGC TGCACCGGCA GACGATTGAC
CTGCTGCAGC TGATCGAAGA CCAGGTGGAT GCGCAGCGCC TGCAGTGGCG CGCCCGGGAG
TTGACGGTCA ACATCAGCGG CGAGCCGCTC AAGATGGAAG TGGACCCGGA AAAAATAGGC
ACCGCGCTGG CCAACCTGCT GTCCAACGCC ATCCGCTACT CGCCGCTCAA AGGTACCATT
GAACTGGCGC TGAGCCAGCA GCCCGGCTTG GTTCATATCG ACATCCGGGA CCAGGGCGTC
GGGGTTGCAC CAGCCGACCG GGAGCGAATT TTCGAGCCCT TTTACCGGGG CGAGCGCCAG
CCCAAGGATG GCGTTCGCGG CAGCGGCATC GGCCTGTCCA TCGTGCACGA ATACATTGCC
GCGCACGGCG GACGCATCGA GTTGTTGCCG CAAGAAACGG GCACCCATTT CAGAATAGAG
TTTCCCCATG TTTATAAAAG CTGA
|
|---|
| Protein sequence | MRPKPAALRP TPKPMLQRFS FRQLLVIAFL LIAVLLGAAS LRALFALQDL TVQSRDNAAR
ALDLSGAAQS LRERSLSMER SSRQSVVLDD RVLRQRFRDE ARDATSILTR LAREDIPAAK
AQPWRTHLDT MLDLLTGPPD TALEREHQLT QEFRELEGIN TAIAMQVQQT IQQRNQSLQE
KLETSRQHLA QQVTWAIVLT VFMALAFGVW FTRPLKRLEN AIIGLGENRL DQVIAIHGPA
DLALVGERLN WLRLRLSELD ADKSRFLRHI SHELKTPLAS LREGVSLLED GVAGPLSHDQ
REIAQILKHN TGVLQSQIED LLRFNTAAFE ARQLHRQTID LLQLIEDQVD AQRLQWRARE
LTVNISGEPL KMEVDPEKIG TALANLLSNA IRYSPLKGTI ELALSQQPGL VHIDIRDQGV
GVAPADRERI FEPFYRGERQ PKDGVRGSGI GLSIVHEYIA AHGGRIELLP QETGTHFRIE
FPHVYKS
|
|---|
| |