Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3358 |
Symbol | purH |
ID | 4690068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3557518 |
End bp | 3559116 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639836371 |
Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
Protein accession | YP_983576 |
Protein GI | 121606247 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCT TGATTTCCGT TTCCGATAAA ACCGGCATCC TCGAATTTGC CCAGGCGCTG CACGCGCTGG GCATCAAGCT GCTGTCCACC GGCGGCACCG CCAAACTCTT GCTTGACGCA GGTTTGCCCG TGACCGAAGT CGCGGAACAC ACCGGTTTTC CGGAAATGCT CGATGGCCGC GTCAAGACGC TGCACCCGAA AGTCCATGGC GGCCTGCTGG CCCGGCGCGA CCTGCCCGAG CACATGGCGG CGCTGCAAAC GCACGGCATC GCCACCATCG ACCTGCTGGT GGTCAACCTC TATCCGTTTG AAGCCACGGT GGCCAAGCCC GGCTGCACGC TGGAGGATGC GATTGAAAAT ATCGACATCG GCGGCCCGGC GATGGTGCGC TCGGCGGCCA AGAACTGGAA GGATGTCGGC GTGCTGACCG ATGCGTCGCA GTACGCCGGC GTGCTGGCCG AACTCCAGGC CGACGGCAAG CTGACCGACA AGACCAGGTT TGCCCTGTCG GTGGCCGCCT TCAACCGCAT CAGCCAGTAC GACGGCGCGA TCAGCGACTA CCTGTCGTCA GTCGCGTTTG ACGCGGGCAA GCTCTCGGCG GCCTATGTGC CCGAGCGCGC GCTGTTCCCC GGCCAGTCCA ACAGCCAGTT CACCAAGCTG CAGGACTTGC GCTATGGCGA AAACTCGCAC CAGCAGGCCG CGCTGTACCG CGACCTGTAC CCCGCGCCGG GCTCGCTGGT GACGGCCAAA CAGCTGCAGG GCAAGGAACT GTCGTACAAC AACATCGCCG ACGCCGACGC CGCCTGGGAA TGCGTCAAGA GCTTCACCGA GGCGGCCTGC GTCATCGTCA AGCATGCCAA TCCCTGCGGC GTGGCCGTGG GCGCGGACGC GCTTGAAGCC TACAGCAAGG CTTTCAAGAC CGACCCGACC TCGGCGTTTG GCGGCATCAT TGCGCTGAAC TGCCCGCTGG ACGAGCGCGC GGCGCTGCAG ATTTCGAAGC AGTTCGTCGA AGTACTGATG GCGCCAAGCT TCACGCCCGA GGCGCTGGAA GTCTTCAAGA CCAAGGTCAA CGTGCGGATT CTGCAGATCG AACTGCCGCC CGGCGGCGAC ACGGCCTGGA AGCAAGGCCG CAACCTGATC GACGTCAAGC GCGTCGGCTC GGGCCTCTTG ATGCAAACCG CCGACAACCA CGAGTTGGCC CTGGCCGACC TGAAGGTGGT CAGCAAGCTG CAGCCGACAC CGGCCCAACT GCAGGATTTG CTGTTTGCCT GGAAGGTCGC CAAGTACGTC AAGTCCAACG CCATCGTGTT CTGCGCCGGC GGCATGACCA TGGGCGTCGG TGCCGGCCAG ATGAGCCGCC TCGACTCGGC CCGCATCGCC AGCATCAAGG CCGAGCATGC CGGCCTGTCG CTGGCGGGCA CGGCGGTGGC GAGCGATGCC TTCTTCCCGT TCCGCGACGG GCTCGACGTG GTGGTCGATG CGGGCGCGAG CTGCGTGATC CAGCCCGGCG GCTCGATGCG CGACCAGGAA GTGATTGACG CGGCCGACGA GCGCGGCGTG GTCATGGTGC TGTCCGGCGT GCGGCATTTC AGGCATTGA
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Protein sequence | MNALISVSDK TGILEFAQAL HALGIKLLST GGTAKLLLDA GLPVTEVAEH TGFPEMLDGR VKTLHPKVHG GLLARRDLPE HMAALQTHGI ATIDLLVVNL YPFEATVAKP GCTLEDAIEN IDIGGPAMVR SAAKNWKDVG VLTDASQYAG VLAELQADGK LTDKTRFALS VAAFNRISQY DGAISDYLSS VAFDAGKLSA AYVPERALFP GQSNSQFTKL QDLRYGENSH QQAALYRDLY PAPGSLVTAK QLQGKELSYN NIADADAAWE CVKSFTEAAC VIVKHANPCG VAVGADALEA YSKAFKTDPT SAFGGIIALN CPLDERAALQ ISKQFVEVLM APSFTPEALE VFKTKVNVRI LQIELPPGGD TAWKQGRNLI DVKRVGSGLL MQTADNHELA LADLKVVSKL QPTPAQLQDL LFAWKVAKYV KSNAIVFCAG GMTMGVGAGQ MSRLDSARIA SIKAEHAGLS LAGTAVASDA FFPFRDGLDV VVDAGASCVI QPGGSMRDQE VIDAADERGV VMVLSGVRHF RH
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