Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3349 |
Symbol | |
ID | 4689157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3543643 |
End bp | 3545076 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639836362 |
Product | deoxyribodipyrimidine photo-lyase |
Protein accession | YP_983567 |
Protein GI | 121606238 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.355989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGTTCA GGCGGGATCT GCGGCTCCAG GACAATGCAG CGCTGCACCA TGCGCTGAAA TCGTGTGAGC AGGTGTTTTG CGCCTTCGTT TTTGACCGGG CCATTCTGGA TTCGCTGCCA AAAGCCGACC GTCGGGTCGA GTTCATCCGG GAATCCCTGG TGGACCTGAA CCGTCAATTG GCAAAACTGG CCTTGCCTGC CGGCCTGCTG ATACGACACG GCACCGCTTT GGACGCCCTG CCCGCCTTGG CGTCTAGGCT TTCGGTCGAT GCAGTGTTTG CCAACCACGA TGACGAGCCT TGCAGCCTGG CGCGCGATGC CGAAGTGCAG GGCTTGCTGG AATGCGCAGG CGTGGCTTTT CACACGTTCA AGGACCATGT CATTTTTGAA CGGCAGGAGG TGCTGACGCT GGCCGGCCAG CCTTATACCG TCTTCACCCC CTACAAGAAG GCCTGGCTGA AAAAGGTCGA TGCCTTTTAC CTCCAGCCCT ATCCGGTTGA GAAGTACGCA TCCGCGCTGG CTGCCCGACC GGCAGATGAA CGGCAGGATG TGCCCGCGCT GGCCGAGCTG GGGTTTGAAA AAACCAACCT GTCAGCGCTC AGGCTACCCA CTGGCAGCCA GGGCGCAGAA GCGCTTTTCG ACGATTTCCT GGACCGCATG CCGCACTATG CGGACACCCG CGACTTCCCC GCCGTTAAAG GTCCAAGTTA TCTGGGCGTG CATTTGCGTT TTGGCACAAT TTCGATCAGG AAAATTACAT TGAACGCACT GGCGCAGCAG CAAACGGGCA GCGAAGGCGC CGCAACCTGG CTCAGCGAAC TGATCTGGCG GGATTTTTAT GCCCAGATCC TGGCGAACTT TCCGCATGCG GCCAGCAGCG CGTTCAAGCC CGGCTATGAC GCGATTGCAT GGGAACAAGG CGAAAAAGCC GAGCTGCTTT TCCAGGCCTG GTGCGAGGGC CGGACCGGCT ACCCGCTGGT CGATGCAGCC ATGGCCCAAC TCAACCAGAC CGGCTACATG CATAACCGCC TGCGCATGGT GACAGCCAGC TTTCTGGTCA AGGATCTTGG GATCGACTGG CGCTGGGGTG AGCGTTACTT TGCCGAAAAA CTCAATGATT TTGACCTGGC ATCGAACAAC GGCGGCTGGC AGTGGGCCGC CAGCACGGGC TGCGATGCGC AGCCTTACTT CCGAATTTTC AACCCCGTCA GCCAAAGCGA GAAGTTTGAC GCCGACGGAA AGTTCATCCG CAAGTACTTG CCGGTACTGG CAAAACTGCC CAAGGCTGCC TTGCACAGTC CGTGGCTGGC TTCGCCGATG GAAAGGGCTG CAGCAAGCGT GGCACTGGGC AGCAACTACG CAAGGCCTGT CGTAGCGCAT GCCGAAGCGC GTGCGCTGAC CTTGCAGCGC TACGCCCTCG TGAAAAAGTC CTGA
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Protein sequence | MWFRRDLRLQ DNAALHHALK SCEQVFCAFV FDRAILDSLP KADRRVEFIR ESLVDLNRQL AKLALPAGLL IRHGTALDAL PALASRLSVD AVFANHDDEP CSLARDAEVQ GLLECAGVAF HTFKDHVIFE RQEVLTLAGQ PYTVFTPYKK AWLKKVDAFY LQPYPVEKYA SALAARPADE RQDVPALAEL GFEKTNLSAL RLPTGSQGAE ALFDDFLDRM PHYADTRDFP AVKGPSYLGV HLRFGTISIR KITLNALAQQ QTGSEGAATW LSELIWRDFY AQILANFPHA ASSAFKPGYD AIAWEQGEKA ELLFQAWCEG RTGYPLVDAA MAQLNQTGYM HNRLRMVTAS FLVKDLGIDW RWGERYFAEK LNDFDLASNN GGWQWAASTG CDAQPYFRIF NPVSQSEKFD ADGKFIRKYL PVLAKLPKAA LHSPWLASPM ERAAASVALG SNYARPVVAH AEARALTLQR YALVKKS
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