Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3306 |
Symbol | |
ID | 4688550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3508784 |
End bp | 3510235 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639836319 |
Product | phage tail collar domain-containing protein |
Protein accession | YP_983525 |
Protein GI | 121606196 |
COG category | [R] General function prediction only |
COG ID | [COG5301] Phage-related tail fibre protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.377169 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACTT TTAAAACCAT TCACACCCTC TACGGCCTGC AGCGCCTGGC TGCGGCCGAG GCCAGCGGCA CGCCAATCAA CCTGCCCACG ATGGCGGTCG GCGATGGAAA CGGCAATCCG GTAGAGCCCG GCGAACTGCA GGCGGTCCTC GTGCGCGAGC GTTACCGCGC CGCTGTCAAC CGCGTGTACC AGGACCCCGA CACGCCGACC AAATTCTTTT GTGAAATGGT GATCCCGGCC GCAACGGGTG GCTTCACGCT GCGCGAGTTC GGTGTTTTTG ATGACGCCGG CGGTCTTTTC GTCGTCGGCA ACCTGCCCGA CATGTACAAG CCGACCCCGG CCGATGGCGC ATTTTCGGAC ACCATCTTGC GCGTCGAGTT CAGCGCCCAG AACGCCACGC TCATTACGCT GCAGATCGAC CCCAACGTCG CGGTTGCCTC GCAATCCTGG GTGATCAACA ACATCACCAT GCAATCCCTG ATCCCGGGCG GCACCACCGG CCAGCTGCTG CGCAAGACCA GCAATGCCGA CGGCGACATG GAATGGGGAA GCCCTGACGA TGTCACCATC ACGGTGGACA CGATCGAGGA AGCGCAGACC CTGGCCGCCG ACCAGCTTGT CGTTGACCTG GTCGCGACCA CCACGCGCGG CCTGGCCCTC TACATCGACG GCAACCGCCT GCGCCGAGAC CAGTGGACAG CCGACCCCGT CATCGTCACC CGCCTGAGCC TGGCCGTGTC GTATGCCGCC GGCACGCGCC TGATCTGCAG CCAGAACGAG CCCACCGGCA GCGCACCGGC ACCGCTGGAG CGCAGCCTCA ACCTGTCCGA TGTGCCCAAT CCGGCCACAG CCCGTGCCAA TCTGGGCGTG TACAACAAGG AAGAATCCGA TCGGGCCGGC CAGCCTGGCC ATATCAACTA CACAGCCCGT AGCACCGCGC CCCCCGGCTG GCTAAAGGCC AATGGCGCCG GGATCAGCCG CACGGCCTAC GCAGCACTCT TCGCCGCGAT CGGAACGACT TTTGGTGTTG GCGATGGCTT CAACACGTTC AACTTGCCTG ACCTTCGCGG CGAGTTCATC CGTGGCTGGG ACGATGGGCG CGGCGTCGAT GGCAGCCGGT CCTTGGGCTC GTCACAGGCC GGTGAAACCG CAAGCCATGG CCATACAGGC TCGACCTCTG CAGCCGGCAT ACATGCCCAC GGTGTTAACG ACCCGGGCCA CAGCCATCAG GTGACCCAAG AAGGCGGCAG GAATACGTCT TTGGCCTACC AAAACGGTCC CAATAGCGCT TTCCGAGGTG AGGTGTCCAC GCTACTGGAG ACCACTCGGA ACGCAACTGG GATTGGCATT TCCGAGAACG GCAACCACAG CCACACCGTC ACCATCAGCG CCACCGGCGG CAGTGAAACG CGTCCCCGCA ACCTGGCCCT GCTGGCTGTC ATCAAGTTCT GA
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Protein sequence | MPTFKTIHTL YGLQRLAAAE ASGTPINLPT MAVGDGNGNP VEPGELQAVL VRERYRAAVN RVYQDPDTPT KFFCEMVIPA ATGGFTLREF GVFDDAGGLF VVGNLPDMYK PTPADGAFSD TILRVEFSAQ NATLITLQID PNVAVASQSW VINNITMQSL IPGGTTGQLL RKTSNADGDM EWGSPDDVTI TVDTIEEAQT LAADQLVVDL VATTTRGLAL YIDGNRLRRD QWTADPVIVT RLSLAVSYAA GTRLICSQNE PTGSAPAPLE RSLNLSDVPN PATARANLGV YNKEESDRAG QPGHINYTAR STAPPGWLKA NGAGISRTAY AALFAAIGTT FGVGDGFNTF NLPDLRGEFI RGWDDGRGVD GSRSLGSSQA GETASHGHTG STSAAGIHAH GVNDPGHSHQ VTQEGGRNTS LAYQNGPNSA FRGEVSTLLE TTRNATGIGI SENGNHSHTV TISATGGSET RPRNLALLAV IKF
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