Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3287 |
Symbol | |
ID | 4688566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3491706 |
End bp | 3493382 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639836300 |
Product | acetate permease |
Protein accession | YP_983506 |
Protein GI | 121606177 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAA AAATACTTGC CAAACTGTCC ACCGGACTGG TTTCACTGGG GATGGCCGGC GCCGCGCTGG CCGCGCCCGC CGTTGAAATC ACCCAGAAGC AGCCGCTGAA TGTTCCGGCC ATCATCATGT TTGCCATTTT TGTCGGCATG ACACTGGCCA TCACCTACTG GGCGGCCAGC CGCACCAAAA CCGCCTCCGA CTTTTACACC GCAGGCGGCG GCATCACCGG CTTTCAAAAT GGCCTGGCGA TGGCCGGCGA CTACATGTCG GCCGCAACGC TGCTCGGTCT GACGGCGATG GTGTACACCA ACGGCTACGA CGCCTACCTG TTCATGATCG CCTTCTTCGT CGGCTGGCCC ATCATCCTGT TCCTGATGGC CGAGCGCCTG CGCAACCTGG GCAAGTTCAC CTTTGCCGAC ATCACGTCCT ACCGCCTTGA CCAGGGCAAG GTGCGCACGA TGGCCGCCAT CGGCTCGCTG ACCGTGGTCT GCTTCTACCT GATCGTCCAG ATGGTGGGCG CGGGCCAGCT GATCAAGCTG CTGTTTGGCC TGGACTACCA CGTTGCCGTG ATCGTCGTCG GCGCCCTGAT GGTCGTGTAC GTGACCTTCG GCGGCATGGT CGCCACGACC TGGGTGCAGA TCATCAAGGC TTGCCTGCTG CTGTTCGGCG GCACGGTCAT CACCGTGCTG GCTTTTTCGC AGTTCGGCTT CAGCTTCAAC ACCCTGGCCG CCAAAACCAT CGAGCTGCAC AAGCTGAAAG ACATGCTGTT CGCCCCCGGC AAACTGCTGC AGGACCCGAT CAACGCCATT TCCCTGGCCA TGGGCCTGAT GTTCGGCCTG GCCGGTCTGC CGCACATCCT GATGCGTTTC TTTACCGTCA ACAACGCCAA GGAAGCGCGT AAATCGGTGC TGTACGCAGC TGGTTTTGTG GGCTTTTTCT TCAACGTCAT CCTGCTGATG GGCCTGTGCG CGATTGTGAT CGTGGGCACC AATCCCGAGT TCTTCGAAGG CGGCACGATT GGCGGCAAGA TTATCGGCGG CGGCAACATG GTGGCGATGC ACCTGGCCAA GGCCGTGGGT GGCAACCTGC TGCTGGGCTT TTTGGCAGCG GTGGCTTTCG CGACGATTCT GGCCGTGGTT TCGGGCCTGG CACTGGCTGG CGCCTCCGCC ATCTCGCATG ACCTGTATGC CCGCGTGATC AAAAAAGGCA ATGTGTCCGA AGCGCAGGAA ATCAAGGTTT CCAAAATGGC CTCGTTCGGC ATCGGCCTGA TCGCCGTGGT GCTGGGCATC GCCTTTGAAA AGCAGAACGT GGCCTTCATG GCGGCGCTGG CCTTCGGCAT CGCGGCGGCC GGTAACTTCC CGGTGCTGTT CCTGTCGATG TACTGGAAAG ACCTGACCAC GCGCGGCGCA TTGGCTGCGG GTTACGGTGG CTTGATTGCC GCCGTGGTGC TGGTGGTGCT GTCCAAATCC GTCTGGGTCA CCGTGTTTGG CTACGCCACG CCGATCTTCC CGTACGACCA GCCCGCCCTG TTTGCCATGC CTCTGGCCTT CCTGCTGGGT TATGTCTTCT CCATCACCGA CAAGAGCGAA CGCGCCGGCA AGGAACGCGC CGCTTTTGCC GACCAGTGGG TTCGCGCCCA GACCGGCTTT GGTGCCGATG GTGCAGTCAG CCACTGA
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Protein sequence | MMKKILAKLS TGLVSLGMAG AALAAPAVEI TQKQPLNVPA IIMFAIFVGM TLAITYWAAS RTKTASDFYT AGGGITGFQN GLAMAGDYMS AATLLGLTAM VYTNGYDAYL FMIAFFVGWP IILFLMAERL RNLGKFTFAD ITSYRLDQGK VRTMAAIGSL TVVCFYLIVQ MVGAGQLIKL LFGLDYHVAV IVVGALMVVY VTFGGMVATT WVQIIKACLL LFGGTVITVL AFSQFGFSFN TLAAKTIELH KLKDMLFAPG KLLQDPINAI SLAMGLMFGL AGLPHILMRF FTVNNAKEAR KSVLYAAGFV GFFFNVILLM GLCAIVIVGT NPEFFEGGTI GGKIIGGGNM VAMHLAKAVG GNLLLGFLAA VAFATILAVV SGLALAGASA ISHDLYARVI KKGNVSEAQE IKVSKMASFG IGLIAVVLGI AFEKQNVAFM AALAFGIAAA GNFPVLFLSM YWKDLTTRGA LAAGYGGLIA AVVLVVLSKS VWVTVFGYAT PIFPYDQPAL FAMPLAFLLG YVFSITDKSE RAGKERAAFA DQWVRAQTGF GADGAVSH
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