Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3277 |
Symbol | |
ID | 4688154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3480188 |
End bp | 3480856 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639836290 |
Product | peptidase M50 |
Protein accession | YP_983496 |
Protein GI | 121606167 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.181105 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACTG CCAACCTGAT TCAAACCATC GCCCTGTATG CGCTTCCCGT GCTGTTCGCC ATCACGGTGC ATGAAGCCGC GCATGGTTAC GCGGCCCGCC ATTTTGGCGA CAACACGGCT TATGTGGAAG GCCGGCTGAC GCTGAACCCG CTCAAGCACA TCGATCCGAT AGGCACCATC GCCATGCCGC TGCTGCTGTA TTTCGCCACC TCGGGGGCCT TCCTGTTTGG CTACGCGAAA CCGGTTCCGG TCAACTTCGG CGCGCTGCGC AACCCCAAGC GCGACATGGT CTGGGTGGCG CTGGCCGGCC CGGCGTCCAA TTTTGCCCAG GCTATTGCCT GGGCGCTGAT GCTGGTGGCG CTGGCGGCCA TGAACGTGGA GGAACCGTTC TTCGTCAAGA TGGCGCAGGC CGGGATTCTG GTCAACCTGG TGATGTGGGC CTTCAACCTG TTCCCGCTGC CGCCGCTGGA CGGCGGCCGC ATCCTGGTGG GCCTGCTGCC CTGGAAGCAG GCGCAAATGG TGTCGCGCAT TGAACCCTGG GGATTTTTCA TCGTGATGGG CCTGGTGATT GCCGGCGTGG TCGGGGCCTT GTGGCTGCGC CCGCTCATGA CCCTGGGCTA CACCTTGATC AATCTCCTGA TTTCTCCCCT GGCGTACCTG CTGGGCTAG
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Protein sequence | MDTANLIQTI ALYALPVLFA ITVHEAAHGY AARHFGDNTA YVEGRLTLNP LKHIDPIGTI AMPLLLYFAT SGAFLFGYAK PVPVNFGALR NPKRDMVWVA LAGPASNFAQ AIAWALMLVA LAAMNVEEPF FVKMAQAGIL VNLVMWAFNL FPLPPLDGGR ILVGLLPWKQ AQMVSRIEPW GFFIVMGLVI AGVVGALWLR PLMTLGYTLI NLLISPLAYL LG
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