Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3190 |
Symbol | |
ID | 4686384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3388472 |
End bp | 3389575 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639836203 |
Product | GDP-mannose 4,6-dehydratase |
Protein accession | YP_983409 |
Protein GI | 121606080 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1089] GDP-D-mannose dehydratase |
TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.41976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0106174 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATTG CATCCAACAC CACTCCCAAA GTCGCTCTCA TCACCGGCAT TACCGGCCAG GACGGCTCTT ATCTTGCTGA GTTCTTGCTG GAAAAAGGCT ATATCGTCCA CGGCATCAAG CGCCGCGCCT CTAGCTTCAA CACCGCCCGG GTGGACCACA TCTACCAAGA TCCACATACA GACAACGCTA AATTCAATTT GCATTACGGT GACCTGAGCG ATTCGAGCAA CCTGACGCGC ATTATTCAGC AGACCCAGCC CGACGAAATC TACAACCTCG GAGCCCAAAG CCATGTGGCG GTCAGTTTTG AAAGCCCTGA ATACACCGCC GATGTGGATG GTATGGGCAC CCTGCGCATC CTCGAAGCCA TCCGCATTCT GGGGCTGGAG AAGAAAACCC GCTTTTATCA GGCTTCTACC TCCGAACTGT ACGGCTTGGT GCAGGAAATT CCGCAAAAGG AAACCACGCC GTTTTATCCA CGCAGCCCGT ATGCTGTAGC CAAACTTTAC GCGTACTGGA TCACGGTGAA CTACCGCGAG GCCTACGGCA TGTATGCCTG CAACGGCATC TTGTTCAACC ACGAAAGCCC GCGGCGCGGC GAAACCTTTG TCACCCGCAA GATCACCCGT GGCCTAGCCA ACATCAGCAT GGGCCTGGAA GATTGCCTGT ATATGGGCAA CATCGACGCC CTGCGCGACT GGGGCCACGC CAAGGACTAT GTGCGCATGC AGTGGATGAT GCTGCAGCAA GACCAAGCCG AAGACTTTGT GATCGCCACC GGCGTGCAGT ACAGCGTGCG CCAGTTCATC GAATGGAGCG CTGCCGAACT CGGCATGCAA TTGCGCTGGG AAGGGCAGGG CGTTAACGAA GTCGGCTACT GGAACGACAA GCCCATCGTC AAAATCGACC CGCGCTATTT CCGTCCTGCG GAAGTTGAAA CCCTGTTGGG TGACCCCACC AAGGCCAAGG AAAAACTCGG CTGGATACCT GAAATCACCG TACAGGAAAT GTGTAAAGAA ATGGTGGCCA ATGACTTGGC TCAGGCCAAG CAGCATGCGT TGCTCAAACA GCATGGCTAC AGAGTCAATG TGAGCATCGA GTAA
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Protein sequence | MTIASNTTPK VALITGITGQ DGSYLAEFLL EKGYIVHGIK RRASSFNTAR VDHIYQDPHT DNAKFNLHYG DLSDSSNLTR IIQQTQPDEI YNLGAQSHVA VSFESPEYTA DVDGMGTLRI LEAIRILGLE KKTRFYQAST SELYGLVQEI PQKETTPFYP RSPYAVAKLY AYWITVNYRE AYGMYACNGI LFNHESPRRG ETFVTRKITR GLANISMGLE DCLYMGNIDA LRDWGHAKDY VRMQWMMLQQ DQAEDFVIAT GVQYSVRQFI EWSAAELGMQ LRWEGQGVNE VGYWNDKPIV KIDPRYFRPA EVETLLGDPT KAKEKLGWIP EITVQEMCKE MVANDLAQAK QHALLKQHGY RVNVSIE
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