Gene Pnap_3167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3167 
Symbol 
ID4686983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3363200 
End bp3364087 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content63% 
IMG OID639836179 
Producthypothetical protein 
Protein accessionYP_983386 
Protein GI121606057 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.672068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.448822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTGC ACCCCAGGAA TTCCCAGCTT CCCTATCCTG CGCGCCGTCT TGCGCTAAAG 
GCTTGCGTGT CCTCCGGGGC GTTGTTGTAT GGTTTTGGTT TTTCTGCCTC GGCATGGGCG
CAGCAGCCCC TGGCGATCTC CACGGCCATC AACCGCGCGG GCCGTCTGCG CGCCTTGTCC
CAGCGCACGG TCAAGGCGTA TGCGCAACTG GTCCTTGGTG TGGAGCCCGA ACAGTCGCAG
GATGTGTTGA CGACAGCGCA GCGCATTGTC AAGACTTACT TGAATGAACT TGGACGTGCA
GGATTTTCCG CTGAAACGGC GGGTTTGCTG GCCGTGTGCC AGGCAGACGC CGACCGTCTG
GCGGGCCTGG TGGCGGGTGC GCCCGCAGCC AGCCGGCTTT CCGAGGCCAA CAAGGCTGCC
GACCAGATGC TGGCCAGTGC GGAGCGCCTG ACAGCGGCGA TAGAGAGCCG GACCAAAGGC
AGCGCAAGAA TCGTCAACAT TGCCGGCCGC CAGCGCATGC TGTCGCAAAG AATGGCCAAG
TCCTTCATGC TGGCGGAAGC CGGCGTGGAT GCGGAGGCCA TGCGCAAGCA GTTGGACACG
GCGCGTTCTG AATTTGTCCT GGCGCTGGAT TCGCTGGAAG CGGCACCGGT CTCAACCCCC
GCCATCAAGC AGGGCCTGGC GCAGGTACGC CTTCAGTGGG TGGTGTACGA CATCGGCTTG
AACGCCAGGG AAAAACTGGT TGCACGCCGC AATGTGGCCA CCACCAGCGA GCGCATCCTG
GAAGTCATGG ACAACCTGAC CGGCCTGTAC GAGACCGCGC TCAGGGAACT GCTGGGAACG
GTGTCCTACA ACGAAATCCG GTTTGCCGGG CTGTATCCGG CATCCTGA
 
Protein sequence
MSLHPRNSQL PYPARRLALK ACVSSGALLY GFGFSASAWA QQPLAISTAI NRAGRLRALS 
QRTVKAYAQL VLGVEPEQSQ DVLTTAQRIV KTYLNELGRA GFSAETAGLL AVCQADADRL
AGLVAGAPAA SRLSEANKAA DQMLASAERL TAAIESRTKG SARIVNIAGR QRMLSQRMAK
SFMLAEAGVD AEAMRKQLDT ARSEFVLALD SLEAAPVSTP AIKQGLAQVR LQWVVYDIGL
NAREKLVARR NVATTSERIL EVMDNLTGLY ETALRELLGT VSYNEIRFAG LYPAS