Gene Pnap_3157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3157 
Symbol 
ID4687107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3353651 
End bp3354472 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content63% 
IMG OID639836169 
Productalpha/beta hydrolase fold 
Protein accessionYP_983376 
Protein GI121606047 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTACG TGACTGCCGG CGACGGCACC CAACTCTATG TCAAGGACTG GGGCAGCGGC 
CCACCGGTGA TTCTGCTTCA TGGCTGGCCG CTGTCATCGG ACAGCTGGGA CGACCAGGCC
ATGGCCATTG CCGAGGCGGG CTTTCGTGCC ATTGCCTATG ACCGGCGCGG ATTTGGCCGC
TCTTCACAGC CCTGGACGGG CTATGACTAC AACACCCTGA CCGATGACCT GGCCGCCGTG
ATCACGCAAA CCGGCGTGCA GGACGCGGCG CTGGTCGGCT TTTCGATGGG CGGCGGCGAG
GTGGCGCGCT ACATGTCGCG CCACGCCGGA CGCTCGGTGT CCAAAGCCGC GCTGATCTCC
TCGGTGGTGC CTTACATGCG TCAGACCGAC GACAACCCGG AAGGCACCGA CCAGGGCGTT
TTCGTCGAGA TGCTTCAGGC CATGAAGGAC GACCGGGCGC AATTTTTCGC CACGTTTTTC
AGGGAATTTT TTGGTGTCAG CCTGATGTCG CACCCGGCCA GTGACGAAGT CATCGACTGG
GCGCGCAGCA TGGCGATGCA GGCCAGCCTG AAGGCCACGC TGGAATGCGC CAAGTCCTTT
GCCACGACCG ACTTCCGGCC TGACCTGGCG GCGTTCAAGG TTCCGACGCT GATCATTCAT
GGAAATGAGG ACAACACCGT GCCGATTGAC GCGTCCGGGC GCGCCGCCGC CAAAGGCATC
GCCAATGCCA GGCTGATCGA GTACGACGGC GCGCCGCACG GCGTGCAGGT CACGCACAAG
GACCGGCTGA GCGATGACCT GATCGATTTT CTGCGCGATT GA
 
Protein sequence
MHYVTAGDGT QLYVKDWGSG PPVILLHGWP LSSDSWDDQA MAIAEAGFRA IAYDRRGFGR 
SSQPWTGYDY NTLTDDLAAV ITQTGVQDAA LVGFSMGGGE VARYMSRHAG RSVSKAALIS
SVVPYMRQTD DNPEGTDQGV FVEMLQAMKD DRAQFFATFF REFFGVSLMS HPASDEVIDW
ARSMAMQASL KATLECAKSF ATTDFRPDLA AFKVPTLIIH GNEDNTVPID ASGRAAAKGI
ANARLIEYDG APHGVQVTHK DRLSDDLIDF LRD