Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3116 |
Symbol | |
ID | 4687136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3306301 |
End bp | 3306969 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639836128 |
Product | sugar transferase |
Protein accession | YP_983335 |
Protein GI | 121606006 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCGAT TTTTTGACAT TCTTTTCACA AGCCTGGCCT TGCTGGTGTT GTCGCCGCTG CTGGTGCCCA TTGCCATCGT GCTTCGCCTG ACAGGCGAGG GCGAGGTGTT CTTTCTGCAA GACCGGGTCG GCAAGGGGGG CAAGGTATTC AAGCTTTACA AGTTTGCGAC CATGCTCAAA GATAGCCCGA CCATGGGAAC GGGAACAGTC ACCGTGAAGA ACGATCCGCG CGTTCTGCCG GTGGGGCGTT TTTTGCGCAA GACCAAGATC AATGAGTTGC CGCAGCTGAT TAATATTCTG AAGGGAGACA TGTGCATTAT TGGCCCGCGC CCGCAAACCC AACGCTGCTT TGATGCGTTT CCCCCGGCTG CGCAGCAGGC CATCAAAGAA GTTTTGCCGG GCTTGTCAGG CATTGGCTCC ATCATGTTCA GGGACGAGGA AAATCTGCTG CATGGGCATG CCGACGCGCG TCATTTTTAT GACCATGTGA TTGCGCCTTA CAAGGGCGCG CTGGAACAGT GGTACGTCAA AAATCAGGGC TTGAGAACCT ATTTCATGCT GATCGGCTTG ACCCTGTGGG TGGTGCTGTT TCCGAAGTCC ACTGCGGTGT GGCATGTTTT TGGCACTTTG CCGAAGCCGG AGCCCGAATT GGCGCGGGCG TTTGGGTGA
|
Protein sequence | MQRFFDILFT SLALLVLSPL LVPIAIVLRL TGEGEVFFLQ DRVGKGGKVF KLYKFATMLK DSPTMGTGTV TVKNDPRVLP VGRFLRKTKI NELPQLINIL KGDMCIIGPR PQTQRCFDAF PPAAQQAIKE VLPGLSGIGS IMFRDEENLL HGHADARHFY DHVIAPYKGA LEQWYVKNQG LRTYFMLIGL TLWVVLFPKS TAVWHVFGTL PKPEPELARA FG
|
| |