| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3115 |
|---|
| Symbol | |
|---|
| ID | 4689489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 3305181 |
|---|
| End bp | 3306287 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639836127 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_983334 |
|---|
| Protein GI | 121606005 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAACT GGAAATGTGC GCGGCCTTCC AGCGAATTCC GGATTTTGCG CGCGTTACTG
CGCAGGGCCA TCATTGTGGC GGCGATGCTG GGGGGCTTCA CTGCCTATCG AGATACCCTG
ACAATTATCG GCACCCCCCC CACCATCCAT AACTATTACG TCGCGACCAC GGGTTCCGAT
GCCAACGCGG GCACGCAGGC AGCGCCGTTT CGCACCATCA AGAAGGCCGC GAGCGTGGCC
AAGCCCAGCA CCACGGTCCA TGTCGCGCCC GGCACCTACG CCGAAACCAT CACCTCCACG
GTGAACGGCA CGGCCTCGGG CCGAATCCGT TATGTCTCCG ATACCAAATG GGGCGCGAAG
CTCGTGCCCG CCGGCGCGGG CGCGAACACC ATGTGGAAGG TCGATGGCGG CTACACCGAC
ATCGACGGCT TCCAGGTTGA CGGCAACGGC GGCACCAGCG TCAGGCAGGG CATCTACCTG
ACGGGCGGCA ACTCCACGGT GAAGAACAGC TGGGTTCACC ATGTGGCGCT GAATTCCGGA
TGCGATGGTG ATGGAGGCGC TGGAATGGTT GCAGATCAGG GCCGAGGGGC GGCTTTCAAC
AATTATGATT TCGTAGGCAA TCTGGTTCAC GACATAGGCG GCAGTTGCGA CACTATCCAG
GGTATTTATC ATTCTTCTTC CGGAACCGTA AAGAACAATA TTGTGTATGC CACCAATTAC
GGCATTCACC TCTACCATGA CGACCACAAT GTCGACGTTG TGAACAACAC GGTATTTGGA
AACCGTTGGT ACGGCATTGT TTACGGGGGG TGTGAAAATG CCTACAACAA CGGGTGCCCC
ACTTCTGGCG TCAATATCCA CAACAACATC GTCTATGACA ATGCTGGCGG GATTACCGGC
CCGAACGCCG ATGAGGACAC CGGCAAGAAT TCGATCAAGA ACAATATCGT GTTTGGAAGC
CGTGTGTACG GGGATTTTGA ATTGGCGCCG AATGCGCAAA GCCAAGTGTC GGGAACGATC
AGTGCCAATC CTCAATTCTT CAACTATGTC CGTACCCGCT TTGCCTGTGT TTCAAAGGGC
TCGATCAACC GGGCCTGCGT ACCGTAG
|
|---|
| Protein sequence | MPNWKCARPS SEFRILRALL RRAIIVAAML GGFTAYRDTL TIIGTPPTIH NYYVATTGSD
ANAGTQAAPF RTIKKAASVA KPSTTVHVAP GTYAETITST VNGTASGRIR YVSDTKWGAK
LVPAGAGANT MWKVDGGYTD IDGFQVDGNG GTSVRQGIYL TGGNSTVKNS WVHHVALNSG
CDGDGGAGMV ADQGRGAAFN NYDFVGNLVH DIGGSCDTIQ GIYHSSSGTV KNNIVYATNY
GIHLYHDDHN VDVVNNTVFG NRWYGIVYGG CENAYNNGCP TSGVNIHNNI VYDNAGGITG
PNADEDTGKN SIKNNIVFGS RVYGDFELAP NAQSQVSGTI SANPQFFNYV RTRFACVSKG
SINRACVP
|
|---|
| |