Gene Pnap_3098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3098 
Symbol 
ID4688704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3282049 
End bp3283458 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content65% 
IMG OID639836111 
Productargininosuccinate lyase 
Protein accessionYP_983318 
Protein GI121605989 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0165] Argininosuccinate lyase 
TIGRFAM ID[TIGR00838] argininosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCAAT TCGACAAGAA ATCCCAAGCC TGGTCCGCCC TGTTTTCCGA ACCCATGAGC 
GACCTGGTCA AGCGCTATAC CTCCAGCGTG TTTTTCGACA AGCGGCTCTG GCAGGCCGAC
ATCGCCGGCT CGCTGGCGCA CGCCGACATG CTCGCCGCCC AAAGCATCAT CGCCCCGGCC
GACCACGCCG CCATCCAGTA CGGCATGGCG CAAATCACGC GCGAGATCGA AGCCGGCGAA
TTTGAATGGA AGCTGGACCT CGAAGACGTT CACCTGAACA TCGAGGCCAG GCTGACCCAG
CTCGTCGGCG ACCCCGGCAA GCGCCTGCAC ACCGGCCGCT CGCGCAACGA CCAGGTCGCC
ACCGACGTGC GCCTGTGGCT GCGCGGCGAA ATCGACCTGA TCGGCGGCCT GCTGACGGAC
CTGCAAAAGG CGCTGGTCGA GATCGCCGAT AAAAACGTCG AAGTGATCCT GCCCGGTTTC
ACGCATCTGC AGGTCGCCCA GCCGGTGAGC TTTGGCCACC ACATGCTGGC CTATGTCGAG
ATGTTCAGCC GCGACGCCGA GCGCATGCTC GAAGTGCGCC GCCGCGTCAA CCGCCTGCCG
CTGGGCGCCG CCGCGCTGGC CGGCACCAGC TACCCGCTGG ACCGCGAACG CGTCGCCACC
ACCCTGGGAA TGGTCGATGA GCAAGGCCAG CCGCAGGTCT GTCAGAACAG CCTGGACGCG
GTGAGCGACC GCGACTTCGC GATTGAATTC ACGGCAGCCG CATCGCTGGC GATGGTGCAC
ATCAGCCGCT TCAGCGAAGA GCTGATTTTG TGGATGAGCC AGAACTTCGG CTTCATCAAC
ATCGCCGACC GCTTCACCAC CGGCTCGTCG ATCATGCCGC AGAAGAAAAA CCCCGACGTG
CCCGAACTCG CGCGCGGCAA GACCGGCCGC GTCGTCGGCC ACCTGATGGG CCTGATCACG
CTGATGAAAG GCCAGCCGCT GGCCTACAAC AAGGACAACC AGGAAGACAA GGAGCCGCTG
TTCGACACGG TGGACACGCT GAAAGACACG TTGCGCATCT TTGCCGAAAT GGTCGGCGGC
ATCACCGTCA AGCCCGAAGC GATGGAGCGC GCCGCCCTGC GCGGCTACGC CACGGCGACC
GACCTGGCCG ACTATTTGAC GAAAAAAGGC CTGCCCTTCC GCGACGCGCA TGAAACCGTC
GCCCACGCGG TCAAGGCCGC CACGACGCAC CAGGTCGATC TGTCGGAGTT GCCGCTGGCG
GTGCTGCAGG AGTTCAACCC GTCGATTGAA AAGGATGTGT ATGAAGTGCT GAGCCTGCGC
GGCTCGCTGA ACGCGCGGAA TATTCTGGGA GGGACGGCGC CCGCGCAGGT GCGCGCGCAG
ATTGCGCGGC ACCGGGCGCG GCTGGGGTGA
 
Protein sequence
MNQFDKKSQA WSALFSEPMS DLVKRYTSSV FFDKRLWQAD IAGSLAHADM LAAQSIIAPA 
DHAAIQYGMA QITREIEAGE FEWKLDLEDV HLNIEARLTQ LVGDPGKRLH TGRSRNDQVA
TDVRLWLRGE IDLIGGLLTD LQKALVEIAD KNVEVILPGF THLQVAQPVS FGHHMLAYVE
MFSRDAERML EVRRRVNRLP LGAAALAGTS YPLDRERVAT TLGMVDEQGQ PQVCQNSLDA
VSDRDFAIEF TAAASLAMVH ISRFSEELIL WMSQNFGFIN IADRFTTGSS IMPQKKNPDV
PELARGKTGR VVGHLMGLIT LMKGQPLAYN KDNQEDKEPL FDTVDTLKDT LRIFAEMVGG
ITVKPEAMER AALRGYATAT DLADYLTKKG LPFRDAHETV AHAVKAATTH QVDLSELPLA
VLQEFNPSIE KDVYEVLSLR GSLNARNILG GTAPAQVRAQ IARHRARLG