Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3075 |
Symbol | |
ID | 4688185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3247006 |
End bp | 3248391 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639836088 |
Product | BNR/Asp-box repeat-containing protein |
Protein accession | YP_983295 |
Protein GI | 121605966 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4692] Predicted neuraminidase (sialidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAGCA TGCCAGGCTT TAAGCACCGC ATGAACCTGA TGGCAGCGCT GGTGCTGTTG GGGATTTTTC TGATGGCCGG CTGGAAAATT GCCAATCGCC TGCCAGCGTC GGATTTTCTG ACCCTTCCCC AGCAGACGGA TGCTTCTGCA AGGGCCTTGC GCGTCACGCA AGCCGTCGGC TCCACGGCAA GCCTGCCGCC GCCACAGCAG TCGCCGGATG GCCGCTTTCA CTTCGATGCC CGGTTTGCAT CCTCCTCGCC CGGTCAGGCT GTTCATGCGG CTTCCATCGT CGAACTGCGC GATGGCCGTT TGCGCGCTGT ATGGTTTTCG GGTTCACGTG AAGGGGCTGG GGACGTGGTC ATCAAGACCT CCGTGATGGA GCCGGAAAGC CTGCGCTGGA GCGAGGAAAC AACGCTTTTG GACCGCCAGC ATCTGCAGCA GGGCTTGTGG CGCTATGTTA AAAAAATAGG CAATCCAGTG ATAGCCCGCA TGCCTGACGA TTCACTGGTG CTGTGGATGG TCAATGTCTC GGTGGGCGGA TGGGCGGGCA GTTCCATCAC CTGGCTGCGC TCCACCGATG ACGGCATGTC CTGGAGCCTT CCGAGAAGGC TGGTGACTTC GCCTTTCCTC AATATCAGCA CGCTCGCCAA GGGGGCACCG ATTTTTTACC AGGATGGGCA GATCGGTTTG CCGGTGTACC ACGAGTTTGT GAGCAAGTTT GCTGAAATCC TGCGCATCAG TCCTGAGGGA CAGGTGCTCG ACAAAACCCG CATTCCCCGC AGCCAGACCA GCCTGCAACC CGTGGTGCTG GTGAGCAGTG CCAGGCAGGC GCAAATTTAC ATGCGCTCGG GCCACAGCAC CGCCGTGATG GCGTCCGAGA CGGTCGATGC AGGCAAAACC TGGTCAGCAA CCCATGCCAC CGCCTGGCCC AATCCGGACT CAGCGCTGGC CGGCGTCGTG ACCGCCACAA GCCAGCAGTG GCTTGCCTTG AACCCGAAAC CCAAAAATCG CGAAATTCTG GCGCTGCTGC AGACCAGCGC GGCAGGCTCG TTCGAGGGGG CCATTCCGTG GGTCGTGGAA TCGTCCCCCA CGCCCGAAAT CCGTTTGCCA GTCAGCGACT ACGAACGCCT GCTGGGCGAT GAACTCCAGA AGCAGGGCGC CAGCCAGGCG CAAATCCAGG CGGATGTCGC CAGCGCCAAA CGCCAGCTGT GCGGCTCGGC CACCTGTTTG CAGGAGTTTT CTTACCCCTA CCTGCTGCAA AGCCGCGATG GCTACCTGCA CCTGGTGTAC ACCTGGCACC GCAGCCGCAT CAAGCATGTC CGGCTTGATC CCCGGCAAGT TCTTCAACCC GACGCGACCC GCCATGCTGC TTCCGCCGCT CACTGA
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Protein sequence | MSSMPGFKHR MNLMAALVLL GIFLMAGWKI ANRLPASDFL TLPQQTDASA RALRVTQAVG STASLPPPQQ SPDGRFHFDA RFASSSPGQA VHAASIVELR DGRLRAVWFS GSREGAGDVV IKTSVMEPES LRWSEETTLL DRQHLQQGLW RYVKKIGNPV IARMPDDSLV LWMVNVSVGG WAGSSITWLR STDDGMSWSL PRRLVTSPFL NISTLAKGAP IFYQDGQIGL PVYHEFVSKF AEILRISPEG QVLDKTRIPR SQTSLQPVVL VSSARQAQIY MRSGHSTAVM ASETVDAGKT WSATHATAWP NPDSALAGVV TATSQQWLAL NPKPKNREIL ALLQTSAAGS FEGAIPWVVE SSPTPEIRLP VSDYERLLGD ELQKQGASQA QIQADVASAK RQLCGSATCL QEFSYPYLLQ SRDGYLHLVY TWHRSRIKHV RLDPRQVLQP DATRHAASAA H
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