| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3040 |
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| Symbol | leuD |
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| ID | 4688424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3211375 |
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| End bp | 3212025 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639836053 |
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| Product | isopropylmalate isomerase small subunit |
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| Protein accession | YP_983260 |
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| Protein GI | 121605931 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAAAAT TCACCGTACA CCAAGGCCTC GTGGCCCCGA TGGACCGCGA GAACGTCGAT
ACCGACGCCA TCATTCCCAA GCAGTTCCTC AAGTCCATCC GCAAGACCGG CTTTGGTCCC
AACCTGTTTG ACGAATGGCG CTACCTGGAC GCCGGCTTTC CCGGCCAGGA CCCGGCCAGC
CGCAAGCCGA ACCCGGATTT CGTGCTGAAC CAGGCGCGGT ACAAAGGCGC CTCGATCCTG
CTGGCGCGCA AGAACTTTGG CTGCGGCTCC TCGCGCGAGC ACGCGCCTTG GGCGCTCGAC
CAGTTCGGCT TTCGCGCCAT CATTGCGCCC AGCTATGCCG ACATCTTCTT CAACAACAGC
TTCAAGAACG GCCTGCTGCC TATCGTGCTG CCCGAGGCGC AGGTGGCGCA GTTGTTTGAC
GAAGCGCTGG CTTTTCCTGG CTACACCCTG ACGATTGATC TGGAGCGCCA GGTCATCGTC
AAGGCGCAAG GCGAAGAACT GCCTTTCGAT GTGCAGGCAT TCCGAAAATA CTGCTTGCTC
AACGGCTTCG ACGACATTGG CCTGACCTTG CTGCAAAGCG ACAAGATCAA GGCCTTTGAA
GCCCAGCGTC TGGCCGGCAA ACCATGGCTG AGCCACACCG TCGCTGGTTA A
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| Protein sequence | MQKFTVHQGL VAPMDRENVD TDAIIPKQFL KSIRKTGFGP NLFDEWRYLD AGFPGQDPAS
RKPNPDFVLN QARYKGASIL LARKNFGCGS SREHAPWALD QFGFRAIIAP SYADIFFNNS
FKNGLLPIVL PEAQVAQLFD EALAFPGYTL TIDLERQVIV KAQGEELPFD VQAFRKYCLL
NGFDDIGLTL LQSDKIKAFE AQRLAGKPWL SHTVAG
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