| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3034 |
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| Symbol | |
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| ID | 4689527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3204466 |
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| End bp | 3206259 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639836047 |
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| Product | succinate dehydrogenase, flavoprotein subunit |
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| Protein accession | YP_983254 |
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| Protein GI | 121605925 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTA CCTCCAAACT TCCCAAGCGC AAATTTGATG TCGTCATCGT CGGTGCAGGC
GGCTCCGGCA TGCGCGCCTC GCTGCAGCTG GCCCGTGCCG GCCTGAACGT CGCAGTCCTC
TCCAAGGTGT TCCCGACCCG CTCCCACACC GTGGCAGCGC AAGGCGGCAT TGGCGCTTCG
CTGGGCAACA TGTCCGAAGA CAACTGGCAC TACCACTTCT ATGACACCGT CAAGGGTTCC
GACTGGCTCG GCGACCAGGA CGCAATCGAA TACATGTGCC GCGAAGCGCC CAAGGTCGTG
TATGACCTGG AACACATGGG CATGCCGTTT GACCGCAATC CCGACGGCAC GATTTACCAG
CGCCCCTTCG GTGGCCACAC CGCCAACTAC GGCGAAAAAC CGGTCCAGCG CGCCTGCGCC
GCAGCCGACC GCACCGGCCA CGCCATGCTG CACACGCTGT ACCAGCAAAA CGTCAAGGAA
AAAACCAGCT TCTTCGTGGA ATGGATGGCG CTTGACCTGA TTCGCGATGC CGCTGGCGAC
GTGGTCGGCG TGACCGCCTT GGAAATGGAA ACCGGCGACG TTCACATCTT CGAAGCCAAG
ACCACCTTGC TGGCCACTGG CGGCGCAGGC CGCATCTTTG CAGCCTCGAC CAATGCCTTC
ATCAACACCG GCGACGGTCT GGGCATGGCG GCGCGCGCCG GCATTCCGCT GGAAGACATG
GAATTCTGGC AATTCCACCC TACCGGCGTG GCCGGCGCAG GCGTGCTGCT GACCGAAGGC
TGCCGTGGCG AAGGCGCGAT TTTGCGCAAC TGCAACGGCG AGCGTTTCAT GGAACGCTAT
GCCCCGACGC TCAAGGATCT GGCGCCGCGT GACTTTGTCT CCCGCTCGAT GGACCAGGAA
ATCAAGGAAG GTCGCGGCTG CGGCCCCAAC AAGGACTACA TCCTGCTGGA CATGACCCAC
CTGGGCGTGG ACGCCATCAT GAAGCGCCTG CCTTCGGTGT TTGAAATTGG CCACAACTTT
GCCAACGTCG ATATCACCAA GGAAGCGATT CCCGTGGTGC CGACCATTCA CTACCAGATG
GGCGGCATCC CGACCAACAT CCATGGCCAG GTGGTCACCC AGGACGCCGA AAACAAGAGC
GTCGTCGTCA ATGGCCTCTA CGCCGTGGGC GAATGCTCCT GCGTGAGCGT GCACGGCGCC
AACCGCCTGG GCACCAACTC GCTGCTTGAC CTGCTGGTGT TCGGCCGCGC CGCCGGCAAC
CACATTGTTG AGTTCAACAA CTCCACGACG CACAAAGAGT TGCCGCTTGA TGCCGCCGAC
AAAACCCTGG CCCGCATTGC GCGCCTGGAC AATGCGACCG ATGGCGAGTA TGCCCAGGAC
GTGGCCAATG ACCTGCGCGC CGCCATGCAG CAGCATGCCG GCGTGTTCCG CACCCAGGCC
ATCATGAACG AAGGCGTGAC CAAGATCGCC GCCCTGCGTG AGCGTGTCAA CAAGATTGGC
CTGAAAGACA AGTCGAAGAT TTTCAATACC GCGCGCATTG AAGCCCTGGA AGTGGAAAAC
CTGATGGAAG CCGCCCAGGC AACCATCGTG TCTGCCGCTG CCCGCAAGGA AAGCCGCGGC
GCGCACTCGG TCGATGATTT CGGCGACACG CCCGAACACC CGAACGGCCG CAACGACACC
GACTGGCACA AGCACACGCT CTGGTACAGC GCAACCAACA GCCTGGCCTA CAAGCCCGTG
CAGATGAAAC CCCTGACGGT GGCGTCTGTG GAACTCAAAA CGCGTACTTT CTAA
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| Protein sequence | MTATSKLPKR KFDVVIVGAG GSGMRASLQL ARAGLNVAVL SKVFPTRSHT VAAQGGIGAS
LGNMSEDNWH YHFYDTVKGS DWLGDQDAIE YMCREAPKVV YDLEHMGMPF DRNPDGTIYQ
RPFGGHTANY GEKPVQRACA AADRTGHAML HTLYQQNVKE KTSFFVEWMA LDLIRDAAGD
VVGVTALEME TGDVHIFEAK TTLLATGGAG RIFAASTNAF INTGDGLGMA ARAGIPLEDM
EFWQFHPTGV AGAGVLLTEG CRGEGAILRN CNGERFMERY APTLKDLAPR DFVSRSMDQE
IKEGRGCGPN KDYILLDMTH LGVDAIMKRL PSVFEIGHNF ANVDITKEAI PVVPTIHYQM
GGIPTNIHGQ VVTQDAENKS VVVNGLYAVG ECSCVSVHGA NRLGTNSLLD LLVFGRAAGN
HIVEFNNSTT HKELPLDAAD KTLARIARLD NATDGEYAQD VANDLRAAMQ QHAGVFRTQA
IMNEGVTKIA ALRERVNKIG LKDKSKIFNT ARIEALEVEN LMEAAQATIV SAAARKESRG
AHSVDDFGDT PEHPNGRNDT DWHKHTLWYS ATNSLAYKPV QMKPLTVASV ELKTRTF
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